| New model in OGS2.0 | DPOGS204802 |
|---|---|
| Genomic Position | scaffold11886:- 370-603 |
| See gene structure | |
| CDS Length | 234 |
| Paired RNAseq reads | 1 |
| Single RNAseq reads | 383 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010725 (4e-40) |
| Best Drosophila hit | alpha-coatomer protein, isoform A (5e-35) |
| Best Human hit | coatomer subunit alpha isoform 2 (2e-37) |
| Best NR hit (blastp) | coatomer protein complex subunit alpha [Bombyx mori] (2e-41) |
| Best NR hit (blastx) | coatomer protein complex subunit alpha [Bombyx mori] (2e-38) |
| GeneOntology terms | GO:0030117 membrane coat GO:0006890 retrograde vesicle-mediated transport, Golgi to ER GO:0016020 membrane GO:0005576 extracellular region GO:0016192 vesicle-mediated transport GO:0005794 Golgi apparatus GO:0006891 intra-Golgi vesicle-mediated transport GO:0030126 COPI vesicle coat GO:0005515 protein binding GO:0005737 cytoplasm GO:0005198 structural molecule activity GO:0000139 Golgi membrane GO:0006886 intracellular protein transport GO:0031410 cytoplasmic vesicle GO:0005179 hormone activity |
| InterPro families | IPR019781 WD40 repeat, subgroup IPR011046 WD40 repeat-like-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain |
| Orthology group | ND |
Nucleotide sequence:
ATGCTGACAAAATTCGAAACAAAGTCAGCTAGAGTGAAAGGGATATCGTTTCACGCGAAG
CGACCGTGGGTTTTGACGAGTCTTCATAATGGTGTAATTCAACTTTGGGACTATCGTATG
TGTACATTGCTGGAGAAATTTGATGAACATGATGGTCCCGTCCGCGGTATTTGCTTCCAC
ATTCAACAGCCTTTGTTCGTTTCCGGTGGTGACGATTATAAAATAAAGGTATAA
Protein sequence:
MLTKFETKSARVKGISFHAKRPWVLTSLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH
IQQPLFVSGGDDYKIKV