| New model in OGS2.0 | DPOGS210051 |
|---|---|
| Genomic Position | scaffold5182:- 109-3396 |
| See gene structure | |
| CDS Length | 2385 |
| Paired RNAseq reads | 2126 |
| Single RNAseq reads | 4935 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012690 (0.0) |
| Best Drosophila hit | CG7338 (0.0) |
| Best Human hit | pre-rRNA-processing protein TSR1 homolog (4e-131) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC012891 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | GI12015 [Drosophila mojavensis] (0.0) |
| GeneOntology terms | GO:0042254 ribosome biogenesis GO:0005634 nucleus |
| InterPro families | IPR007034 Ribosome biogenesis protein BMS1/TSR1, C-terminal IPR012948 AARP2CN |
| Orthology group | MCL13987 |
Nucleotide sequence:
ATGAACCTGCGCAACGCCACCAACGAGCTATTCACAAATGACACGTCCACAACGTCATAT
CACGTGACCTGTGATGTTGGCATGCAGCAGGCTCATCGATCAGGAAATCTTAAACAAAGT
AACAAGGCTCATAAGTCTCGACATAGATCAAAACGGGGAATTTCGGCCGCTGTGAAGGGT
AAAGTAAATGTAAAGGAATTTGTGCGTCGAAACCGGCACATCCTTAAGAAAGAGGAGCGC
CGTCATCAAGCCCTACAGATTCGTAAAAACAAACGTGAAGAAGTTTTGTCAAAGAAACGC
GCACTCGGCGGTAATCGCAATCCTCCGTTTCTTGTGTGTGTGGTGCCGCTTAATGCCCAG
CTCGATGTTCAGTCTGCGCTGGTTATACTGAAGACCTGTTCTGAGGGCGCTATTGTTAGT
CAAAGTGAGAGTGGAGTCTTACATATCCGGCTACCACATTTTAAACAGAGATTTTCATTT
GTTTGTCCTGAGGTTGGCAATGACTTTGCACTGCTAGATGCACTCAAGATATCTGATACA
GTTTTGTTTGTGAGTTCAGCTCTGGAGGAGCCAGTTGATGAATGGGGTGAGAAAGCTTTA
GCATTGTCCATGGCCCAGGGAATGCCTACACCTGTGGTGGCAGCTATGGATATTGAGGGT
GTCCATCCTAAAAAAAGAACGAATGAAAAGCAAAATGTACAAAAACTCATTTCTAAATGG
TTGCCGGAAGAGAAAGTTATGCAGCTGGATAAGAGTTCTGATGGATTAAACCTCTTGCGT
AGAATCGGTAACCAAAAACGGAATATATTGCATCACAGGGAAAAGAGGCCATATCTTCTC
GCGGAGGAAGTTGAGTATGTGCCAGATACTGAAGGGGATCATGGTACTTTAAAAATCAGT
GGTTATCTCAGAGGCATGCCCTTAAATGTTAATGGACTCATTCACATTACTGGTCTAGGT
GATTATCAAATGTCAAGAATTGATTGCTTGGACGATCCCCATCCTTTACAAACAGGCAAA
GAACATGCAAAACAAGATATGATGGATGCTGAAAACAACAAAGTGTCAATACTGCAAGTT
GCCAATCCTGACAAACAAGAATCTTTAGAGAGAGAAAATATACCCGATCACATGGATGCT
GAACAAACTTGGCCAACTGAAGAAGAAATTATGGAATCAAATATGGAGACTAAGAAGAAA
ATTAAGAAAGTTCCCAAAGGTTGGTCAGATTATCAGGCAGCTTGGATTGTGGAGTCGGAT
GCTGAAGGTGATAACTCTGAAGAAGCCAGTGATGAAGATGATGATGATGATGATAATGAA
AATGATGAATTTATGTCATGCGAGGAAGATGAGTCTGATAAAGAAGTTAATGAGGAGATC
AATGACTTTGAATCTGTCATGGAATCAGAAGTAGGACCCACGGATGAAAGATATGATGCA
ACTATTGATGCCCATGAAGAGCATGAGATGTTGAAAAAGTTGGCAGCAGCTAAGGAAGAT
CAACAATTTCCAGATGAAGTAGATACTCCACAAGATGTACCAGCAAGGGAGAGATTTGTC
AGATATAGAGGTCTTGAATCATTTAGGACATCTCCATGGGACCCTAAGGAAAATCTTCCA
CAGGATTATGCTAGGATCTTCCAATTTGAAAACTATGACAGAACAAGAAGAAGGGTATTT
AAAGAACTTGAAGACAGCCTTGAAAATATGTATGGATTGAACATAACAATTCATGTGAAA
GGTGTTAGGCAAGATTTATGGAAGGCATTCCACGAATCCAATGGCAACACTCCACTATCA
GTATTTGGCCTGCTGCCGCATGAACATAAGATGTCATTAATGAATGTTGTTCTGAAGCGC
ACCGGTGTCAGCGAGGATCCTATTAAAAGCAAAGAGAGGCTCATCTTCCAAGTCGGATAC
AGGAGATTCATTGTCAATCCAATATTTAGCCAACACACGAACGGGTCCAAACACAAATAC
GAGAGATTCTTCCAACCAGGTTCGACGTGTGTCGCTACATTTTTCGCCCCTATTCAGTTT
AGTCCATCAACAGTTTTGTGTTTCAAGGAAAAGAAGAACACAAAGTTGCAGCTGGTGGCA
TCTGGAGTGCTGCTGTCCTGTAATCCAGACAGACTGGTTATTAAGAGGATAGTGCTCTCT
GGTCATCCTTACAAGACCAGACATAATTCTATATTCGCGAATTTTAAACCGCGATGTGTT
AAAAGAGCTCACGGTTCCTTGGGAGACCAACATCAAAGACGACAATGCTGCCCCATCAAA
TATTACGAACTCACTAAGAATATTTTCGTCTTAAATTTGTACGCGGTAGAAGTTGGAGCG
AGAGGTATAATGGCTAGATCTCTCCACAACCTACTTAATGACTAG
Protein sequence:
MNLRNATNELFTNDTSTTSYHVTCDVGMQQAHRSGNLKQSNKAHKSRHRSKRGISAAVKG
KVNVKEFVRRNRHILKKEERRHQALQIRKNKREEVLSKKRALGGNRNPPFLVCVVPLNAQ
LDVQSALVILKTCSEGAIVSQSESGVLHIRLPHFKQRFSFVCPEVGNDFALLDALKISDT
VLFVSSALEEPVDEWGEKALALSMAQGMPTPVVAAMDIEGVHPKKRTNEKQNVQKLISKW
LPEEKVMQLDKSSDGLNLLRRIGNQKRNILHHREKRPYLLAEEVEYVPDTEGDHGTLKIS
GYLRGMPLNVNGLIHITGLGDYQMSRIDCLDDPHPLQTGKEHAKQDMMDAENNKVSILQV
ANPDKQESLERENIPDHMDAEQTWPTEEEIMESNMETKKKIKKVPKGWSDYQAAWIVESD
AEGDNSEEASDEDDDDDDNENDEFMSCEEDESDKEVNEEINDFESVMESEVGPTDERYDA
TIDAHEEHEMLKKLAAAKEDQQFPDEVDTPQDVPARERFVRYRGLESFRTSPWDPKENLP
QDYARIFQFENYDRTRRRVFKELEDSLENMYGLNITIHVKGVRQDLWKAFHESNGNTPLS
VFGLLPHEHKMSLMNVVLKRTGVSEDPIKSKERLIFQVGYRRFIVNPIFSQHTNGSKHKY
ERFFQPGSTCVATFFAPIQFSPSTVLCFKEKKNTKLQLVASGVLLSCNPDRLVIKRIVLS
GHPYKTRHNSIFANFKPRCVKRAHGSLGDQHQRRQCCPIKYYELTKNIFVLNLYAVEVGA
RGIMARSLHNLLND