| New model in OGS2.0 | DPOGS214658 |
|---|---|
| Genomic Position | scaffold1015:- 89405-94926 |
| See gene structure | |
| CDS Length | 882 |
| Paired RNAseq reads | 375 |
| Single RNAseq reads | 986 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001872 (1e-87) |
| Best Drosophila hit | CG15916 (9e-26) |
| Best Human hit | putative ribosome-binding factor A, mitochondrial isoform 1 precursor (1e-09) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Acyrthosiphon pisum] (7e-42) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL013615 [Aedes aegypti] (1e-41) |
| GeneOntology terms | GO:0006364 rRNA processing |
| InterPro families | IPR000238 Ribosome-binding factor A IPR015946 K homology domain-like, alpha/beta |
| Orthology group | MCL15636 |
Nucleotide sequence:
ATGCCTAGTGTTAAAAGTTTAACTAAAGTTAAAAACGAACCTGGGAAACGTGGAGTGAGA
CGGATAGCAATGCTTAATAAATTGTTTATGAAAAATATTACGGATATTTTATCCACAGGC
ACAGTGTCTTTAAAAGTAGTCGGACAAGGAATAGAAATATCAAAGGTGAAAATAATGCCA
AATCTCCAATCAATAAATGTTTTCTGGGTGTGTAAGGGTGATGCTTCAGATGTACAAACA
GAAGCCCTGCTCCATTCCATTGCAGGTCCTCTCCGACATGAGTTGTCAACACTGAGGTTG
ATGGGAGAGGTGCCATACATTTTTTTTGTTAAAGACAGGCAAGAATCCCAAACTGTAGAC
CTTGATAGAAGACTCGCTGTAGCTGATTACGGAGATGATTACACTCCAACGGAAATAGGA
CATTTACTAAGAACAGACTTCACTCTAAACACAAAACTATCACCTGAAGTCAAGGCTAAA
ATAAAGCAGCTAGAGGAGAAAATATATGATTCCGAAGATCCAATACCCGAAATGACTCAT
AATGTGTACGGATTGGATCATGCCAAGATACTGAATCGTCTTCTTGGAGCGAGAAGGAAG
ACCAGGGACGCTTGGGACAGTATTAAAGCTGAGGCTCCCAGCATAACATACAGAGCGGAA
CCAAAGACCTCTAATATTGATATCGGCAGACAAAAGAAAGATATATCAGAATTTCTTCTC
CAACGACAGATACAACAAAATAAGCTTTACAAAAAAATGAGGAGTGACCAAAAGAATGTA
GAAATAGCGACCACTGAAGAAGAACAGGTCTATTTTGAAGAAGACTACTATGAAGACGAA
GAAGACATCTACGAGTTTGCAGAAGACGATAGAAGAAATTAA
Protein sequence:
MPSVKSLTKVKNEPGKRGVRRIAMLNKLFMKNITDILSTGTVSLKVVGQGIEISKVKIMP
NLQSINVFWVCKGDASDVQTEALLHSIAGPLRHELSTLRLMGEVPYIFFVKDRQESQTVD
LDRRLAVADYGDDYTPTEIGHLLRTDFTLNTKLSPEVKAKIKQLEEKIYDSEDPIPEMTH
NVYGLDHAKILNRLLGARRKTRDAWDSIKAEAPSITYRAEPKTSNIDIGRQKKDISEFLL
QRQIQQNKLYKKMRSDQKNVEIATTEEEQVYFEEDYYEDEEDIYEFAEDDRRN