| New model in OGS2.0 | DPOGS214677 |
|---|---|
| Genomic Position | scaffold1015:+ 96288-104967 |
| See gene structure | |
| CDS Length | 2886 |
| Paired RNAseq reads | 677 |
| Single RNAseq reads | 1976 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001949 (2e-34) |
| Best Drosophila hit | Retinoblastoma-family protein (6e-73) |
| Best Human hit | retinoblastoma-like protein 1 isoform a (9e-120) |
| Best NR hit (blastp) | PREDICTED: similar to retinoblastoma-like protein 1 isoform a [Apis mellifera] (3e-165) |
| Best NR hit (blastx) | PREDICTED: similar to retinoblastoma-like protein 1 isoform a [Apis mellifera] (4e-149) |
| GeneOntology terms | GO:0043550 regulation of lipid kinase activity GO:0005634 nucleus GO:0005515 protein binding GO:0005667 transcription factor complex GO:0008134 transcription factor binding GO:0016568 chromatin modification GO:0045449 regulation of transcription GO:0044419 interspecies interaction between organisms GO:0000122 negative regulation of transcription from RNA polymerase II promoter GO:0007049 cell cycle |
| InterPro families | IPR011028 Cyclin-like IPR002720 Retinoblastoma-associated protein, A-box IPR002719 Retinoblastoma-associated protein, B-box IPR013763 Cyclin-related |
| Orthology group | MCL11640 |
Nucleotide sequence:
ATGGCTAAACCAGAAGAAAGTGAAGAAAATTGGGTGGCCACTATGGACAATCTGTGCTCA
CAATTAAATGTTGATCCAGGTGCGGCGAAAAAATCAAAGGAATCATATTCGGAGATTAAA
CAAAATTATACATTGGACGGTGATGAGCTGCACTGGATGGCGTGCGCTCTATACGTCGCG
TGTCGTACTTCTATCACGCCGACAGTGCAATCAGGAAAGGCTGTTGAGGGCAACTGTGTC
AGCCTCACCAGACTTCTTAGACTATGTAACATAAGCCTTATCCAATTTTTCAACAAAATC
AAGAACTGGATGGAAATGGCTTCAATGTCAACAGATTTTAAAGATAGGATAACTAGATTA
GAACGTAAATTTGCAGTATCCACTGTACTTTTTAGAAAATTCCAACCAATATTTCAAGAA
ATATTCTCTGGTTTAACAAATGAACCAGTTAAAAGCAACACTAAAAGCAAGAAACAAAAG
TTACAACCTTGTACAACAAATGCTTTATTTGAGTTCAGCTGGTGTTTATATGTGTGTGTG
AAGGGAGAGTTCCACAACTCGGCCGATGATCTTGTTGATATGTATCATGTTTTATTGTCA
TGTCTTGACTTTGTTTTTGCTAATGCCTTCATGGCTAGACGCTATGATGTTATAAATCCT
GCTTTCAAAGGCTTACCGTCAGATTGGCTTAAAGATGATTTTGAATTACCAAAAAAGCCA
CCCTGTATTATATCAGTGCTGTGTGAGATCAAGGAGGGATTGGCGGTTGAAGCCGCAACT
ATGAAGGAGTACAGTTGGAGACCTGTGATAAAGACGTTTTTTGACAAAGGAATTCTTAAA
GGTAACAATGATCAACTGACAGGTTTACTTGACATCGGTAATTTTGATGCAAATCTAAAA
TCACTGAACAATTTATATGAAACCTATGTATTAAGTGTTGGCGAATTTGATGAGAGGATA
TTTTTGGGGGAGCATGCCAATGAACAGATTGGGACAAAGAATAAGGTTTCGGGGGATGAA
ATATCACAAGTCATAGCATCATTTGGACCCAGTTCTCGAGCATGTCCTGACACACCCCTA
ACGGGCAGACGTTACTTGGCGCGTCGTGAGGAGCTGACACCAGTATCAGAGGCCACCAAC
AGTCTAGCTCGACTGGCTGCCCTGCTGAGACAAGCACGACCCAAGCCCTCACCCACCTTA
TTAAGATTTTTCGCCGATTGCGGTGTGGATAAAGTGACTATAGTGAAGAATGTGGTGCAA
CCCTGTAATGGATGGATGGAGAAGTTCTCGGAGAGTCTGTCGGAGTGTAACTGCAGTAAG
GAGACCATAGCGTTCAGGTGCAACATGGTTACATGCCTGTACTATAAAGTGTTTGAACAC
ATCATAACGGAGGAGCACAGGAAGAAACCGCAGTTGTCATTACAGATTCTTCTGTCCCAG
GAGACGTTCCAATTGACGGTGTACGCTTGTTGTACGGAGGTAGTCCTACATGCCTATGGA
GTGCATTCCCTTCGTTTCCCGAGGGTCCTTCAGATATATGGTCTCAGTGCGTTCCACTTC
TACAAGATCATTGAGCTGGTGGTGCAGGCCGTGGTGCAGAAACTGAGCCGGGATGTCATC
AAACATCTCAATGCGATTCTTCTATCCCAGGAGACGTTCCAATTGACGGTGTACGCTTGT
TGTACGGAGGTAGTCCTACATGCCTATGGAGTGCATTCCCTTCGTTTCCCGAGGGTCCTT
CAGATATATGGTCTCAGTGCGTTCCACTTCTACAAGATCATTGAGCTGGTGGTGCAGGCC
GTGGTGCAGAAACTGAGCCGGGATGTCATAAAACATCTCAATGCGGTTGAAGAGCAAGTC
TTAGAATCATTAGTATGGACATCTGACAGTCCTCTCTGGGATCAGCTCAGCAAGAATCCC
ATACCGGCCGCCATTGAAGTATACGCACAAGATTCACCCAACAGAAGGAATGCCAGTGGT
TTACAATCTCCGATATCAGCGGCCATAGATAGGTATTTAACACCGATGGCAGATCAAGCG
AAGAAACAGCTCTTTAAGGATAACATCAAACCTGGACAATCACTGCTAGTTCAAACAAAT
AACAACGTTAAGCAGGAGCCACAACAAGTGCCGATTGTGTCAACAGCGGAGACCACACCC
AACACAACACCCAAGAAAGCAAATAACTCATTAATACTTTTCTTCAGGAAGTTCTACAGC
CTGGCTGTGATCAGGATGAATGATTTGTGCACGAGGTTGAAGTTGACAGACGACGAGCTC
AAGAGGAAGATATGGACCTGTGTGGAGCACTCCGTCATGAACCAGACACAGCTCATGAGG
GACAGCAATCAAGTTGAGAGAACATTCGCGGACATCATGCGCTGTTACAGGCAGAGACCT
CTGGCGGACAATCATGTTTATAGATCAGTTCTTATTAACAAAGGAAACGATGAAGAATCA
CCGGAGAGAGGAGATCTTATAAATTTTTACAATAAAGTATATGTTAAATGCATGCAGAAT
TTCGCGCTACGGTTCACTGGGAAACATAAAGATGGCTGCAGCCTATCTCCGCTGCCGGCT
GGTCGCGCCGGACGCTCGGGCCGCTCGGGCTGGTCTCCCGGCGGCCAGCGAGTGTCGGAG
CGCCACCAGTTGTACGTGAAGCCGCTCACCACCCCGCCTCACCACCACCACCACCTCACC
TACAGGTTCAGCCGCAGCCCCGCCAAGGATCTCCAGGCCATTAACACTATGGTGTCGTGC
GAGGTGGGAGGAGTGAAGCGGGCTGTGGACGGCGAGGCTGGCGACGTGGTCAAAAGAGCT
CGGTGTGCGGCGCCGGGGGTCGCGCGCAAGCTACAGGGTCTAGTTAGCGACCGACAGGCT
GTTTAG
Protein sequence:
MAKPEESEENWVATMDNLCSQLNVDPGAAKKSKESYSEIKQNYTLDGDELHWMACALYVA
CRTSITPTVQSGKAVEGNCVSLTRLLRLCNISLIQFFNKIKNWMEMASMSTDFKDRITRL
ERKFAVSTVLFRKFQPIFQEIFSGLTNEPVKSNTKSKKQKLQPCTTNALFEFSWCLYVCV
KGEFHNSADDLVDMYHVLLSCLDFVFANAFMARRYDVINPAFKGLPSDWLKDDFELPKKP
PCIISVLCEIKEGLAVEAATMKEYSWRPVIKTFFDKGILKGNNDQLTGLLDIGNFDANLK
SLNNLYETYVLSVGEFDERIFLGEHANEQIGTKNKVSGDEISQVIASFGPSSRACPDTPL
TGRRYLARREELTPVSEATNSLARLAALLRQARPKPSPTLLRFFADCGVDKVTIVKNVVQ
PCNGWMEKFSESLSECNCSKETIAFRCNMVTCLYYKVFEHIITEEHRKKPQLSLQILLSQ
ETFQLTVYACCTEVVLHAYGVHSLRFPRVLQIYGLSAFHFYKIIELVVQAVVQKLSRDVI
KHLNAILLSQETFQLTVYACCTEVVLHAYGVHSLRFPRVLQIYGLSAFHFYKIIELVVQA
VVQKLSRDVIKHLNAVEEQVLESLVWTSDSPLWDQLSKNPIPAAIEVYAQDSPNRRNASG
LQSPISAAIDRYLTPMADQAKKQLFKDNIKPGQSLLVQTNNNVKQEPQQVPIVSTAETTP
NTTPKKANNSLILFFRKFYSLAVIRMNDLCTRLKLTDDELKRKIWTCVEHSVMNQTQLMR
DSNQVERTFADIMRCYRQRPLADNHVYRSVLINKGNDEESPERGDLINFYNKVYVKCMQN
FALRFTGKHKDGCSLSPLPAGRAGRSGRSGWSPGGQRVSERHQLYVKPLTTPPHHHHHLT
YRFSRSPAKDLQAINTMVSCEVGGVKRAVDGEAGDVVKRARCAAPGVARKLQGLVSDRQA
V