| New model in OGS2.0 | DPOGS202907 |
|---|---|
| Genomic Position | scaffold4665:+ 409-7592 |
| See gene structure | |
| CDS Length | 1914 |
| Paired RNAseq reads | 1264 |
| Single RNAseq reads | 3226 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004180 (5e-146) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | Optineurin, putative [Pediculus humanus corporis] (9e-20) |
| Best NR hit (blastx) | Optineurin, putative [Pediculus humanus corporis] (9e-30) |
| GeneOntology terms | GO:0005622 intracellular GO:0008270 zinc ion binding GO:0008150 biological_process GO:0005737 cytoplasm |
| InterPro families | IPR021063 NF-kappa-B essential modulator NEMO, N-terminal |
| Orthology group | MCL19911 |
Nucleotide sequence:
ATGGCATCCAGTCCTGACAATGAAGACGACTCCCTCATCGTGATCCTGGGTACATCCCCC
GGCGGCAGTATGGTTGAAAAAAGTAATGGCACAACAAATGGAGATCTAGAAAGATCACAA
ATAGAAGATGCTATGAGATCACTATCAAATGAAGCTAATATGGCTTTTAAGGCTCAATTT
AATTTGGGTGAAAGTCCGTCACCAGCCAGTATGATGGTAGCGAGTACTATAATAACCGAG
GACAGGAGTACAGAGGAGTTGCAAAAGAGATTCGGCGATTTATTGGACGAGAATTTTGTA
TTGAAGGAGACTTTGAAGCAAAACAACGACTCTATGAAGGAGCAGTTCATACTGATAGCG
TCGTGTCAGGAAGATATGCTGAAGACACACCGACTGCACAAGGAAAAGTTTGATGAAACA
AGGGAGCTTGTCGAGCGGCTTAGACAAGAAAATAAGCAACTCAAAATGGATATATCACGT
CTGGCTGAAGGTGAACACAACAGTATCGGCCAAAAAAAACTGTCAGGCTTCGAACTGGTC
ACATCAGTTGAGGAAGATACTATCGAGAAGCTGTCATCACAGTTAGAACTCGTCGAGAAA
CAGAGGCGACAGTTGATAGTTGACAACGAGAAGCTGAGCTGGCAGAAGGAATCCCTAGAA
CATATAGTTGACTCCATGAACAAGGAGAGAGACGACGCCAAGAAAAAGCTACACAAGGTC
GAGCTTCAACTCTCCACTATGGAGAACGATCATGCTCAGGAAGTGAGCAAACTGCACTGC
ATCATAAGTGACCTACAAAACAAACTGAAGACGCAGAGTGTGAATACATCTCTGGAGGAG
GTTTCCAAACGTGATGTGTACATACAGAAGCTGGAGGGCAAGATGTCCTTATTACAGAAT
GAATTGAAGAAAGCTCAGATAAAGATCCTCGACCTGGAAAATATTAAGTTGGAATTCAGC
CAGCACAAGTCCAACGTGTCTGAGACGGTGAAGGTGTACAAAGACCAGATCCAGGAACTA
AAGGATAGAATTAAAGAGGTCCAGACGACGGTGTTCCAGCCCATCCGCGTGTCCGTGTCG
GAGCCGTCGAGTTCGTCCGAGTTCCTCAACAATGTCAAGCTCTACGACCGCACGCTCAAG
CACCTGGCCGACTACCTCAACTCGCTCAGTAACGGTATACAGGATCTTAAGATCGACCGC
GGCTCACTGGACAAGGTCAAGTGTGGAGTCGGGGAGCTCAAGACACTCATAGCAACACAG
CACTCTAACGTTGTGTCTAACGTAGCTCATGTCCGCAGCACGCTGTCCACGTTCGAAGGC
ATCTTTAAGGATCACAACGAACTGTTGAAGAGATCCGTCACCAACACCGACACGGTGCAG
GCTCCGTGTGTGCAGCAGTTGACGGAAGCGCTCGTGGCTCGCGGCCAGCAGGTGTCCGAA
CTGCTGGAAGAGCTGGCAGCTGTGAAGGCACGCACCGACGACGCCGACTTACTGAGGGCC
CAGGTCGACTTGTACAAAAGCGACTTCGAAGCTGAGAGGGAATCCCGAGAGAAGATGGCC
AGCGAGAAAGAAAATCTCCTCGCAGACCTCAGAGTGGCTCAGAAGAAGATACAAGACTTG
ACAACACAGTTGGAGGAGCTTCGTGTTCTGAGTCCAAGCCTGCACAAGAGCATCACCAGC
CCTCGCCCGCGGTCCGCTGGCAAGCCCGCCCCCACCACCACCGCCCGCACTGCCCCCACC
ACCGCTGTCGCAGCCAACGCTGTTCGTAAGAAGAAGAGAACTGAGAAGTCAGTGGAGGAG
GCCGCCAGCCGCGAGACGACTCCGCCGCCTGCCAAGTACATCTGCCCCGCCTGTGACGGC
AGCTTCAGGACATACATGATGCTGGAGAGACACGTGCACGAGTGTCTGCTCTAG
Protein sequence:
MASSPDNEDDSLIVILGTSPGGSMVEKSNGTTNGDLERSQIEDAMRSLSNEANMAFKAQF
NLGESPSPASMMVASTIITEDRSTEELQKRFGDLLDENFVLKETLKQNNDSMKEQFILIA
SCQEDMLKTHRLHKEKFDETRELVERLRQENKQLKMDISRLAEGEHNSIGQKKLSGFELV
TSVEEDTIEKLSSQLELVEKQRRQLIVDNEKLSWQKESLEHIVDSMNKERDDAKKKLHKV
ELQLSTMENDHAQEVSKLHCIISDLQNKLKTQSVNTSLEEVSKRDVYIQKLEGKMSLLQN
ELKKAQIKILDLENIKLEFSQHKSNVSETVKVYKDQIQELKDRIKEVQTTVFQPIRVSVS
EPSSSSEFLNNVKLYDRTLKHLADYLNSLSNGIQDLKIDRGSLDKVKCGVGELKTLIATQ
HSNVVSNVAHVRSTLSTFEGIFKDHNELLKRSVTNTDTVQAPCVQQLTEALVARGQQVSE
LLEELAAVKARTDDADLLRAQVDLYKSDFEAERESREKMASEKENLLADLRVAQKKIQDL
TTQLEELRVLSPSLHKSITSPRPRSAGKPAPTTTARTAPTTAVAANAVRKKKRTEKSVEE
AASRETTPPPAKYICPACDGSFRTYMMLERHVHECLL