| New model in OGS2.0 | DPOGS207866 |
|---|---|
| Genomic Position | scaffold5500:- 172-5379 |
| See gene structure | |
| CDS Length | 1521 |
| Paired RNAseq reads | 1254 |
| Single RNAseq reads | 3691 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | CG6695, isoform A (8e-67) |
| Best Human hit | splicing factor, arginine/serine-rich 16 (3e-52) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC008355 [Tribolium castaneum] (1e-95) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC008355 [Tribolium castaneum] (2e-81) |
| GeneOntology terms | GO:0003729 mRNA binding |
| InterPro families | IPR019147 Splicing factor, suppressor of white apricot |
| Orthology group | MCL16816 |
Nucleotide sequence:
ATGTGGCACGAAGCAAGAAAACAAGAACGTATGATTCGTGGAATGATTGTAGATTATCGT
CGCAGAGCTGAACGTCGTAAGGATTTTTATGAAAAGATTAAAGCAGAACCAACCCAATTT
TTACAACTTCATGGAAGACAATGTAAAATACATTTGGATCCAGCTGTAGCAGCGGCCGGG
GAAGGACCAGCTATTATGATGCCATGGCAAGGGGATACTAATAATATGATAGACCGTTTT
GATGTTCGCGCACATCTGGATATTATATCTGAAGTTAAGGCACCCTATATACCACCCGAA
GATCTCAACCAAGAGGAAAGACAATGCAATTATGAAAGATATAGGATTCTAGCACAAAAT
GCCTTTTTAGGCATAAGCGAGGACAAATTTCTACAGCAGCTAGCCATTGAGGAGCAGTTC
GGTGTTACCATTGAAGAGAAAGAGATGCAAAGGGAGAAGTTAAGTGAAAAGAAAGGGGTC
GGTGCTGCCATTGGATACAATTATAACGATCCAACGGTCCAACCATCCACCTCTAACGGC
CCAGAGATGAAGAAGGCGGATTCAAAGGAGTCCGACGATGACTCGGACCTTGAGATCATT
GATGTGGATCTTAGCATTGATGTTAATAAAATGGATGCTTCACAGGCTCACGAGTTGAAT
GCCGTTGGACCTCAATATGGTATGGCGGGCTGCGATCTATTCTCATTCCTCACGGGAGAT
GCCGATGACGCTGAGCATCAAAAACAATTGCTTCGGGAAGAGAAAGAAAAAGCTATGTTT
TCAGGGAGAAAGAGCAGGAGAGAGAGACGGGCACATAGGGATAAGAAGCTAGCGACTCGT
GTAGTAAGTCCCCCGAGCTACGCGGCCGCCCCTTCCGCGCCCGTCGCTCCGTCCCGCTCG
CCGAGCCGATCCCGTTCCCGCACTCCGTCACCTGACAATACAAACATACAGTTCATAACA
TCCTTCGGACCGGAAGACGACGATACCGCACCACTTCCAAACAAGCCGTTGTATGCCGAC
AAGGTGAAGCAAAATTTAAAGAAAGGAATGTCCTACTCTGAAATAGTGAAGAAATCTAAA
ACTTTGTCATCGTCATTCGGTGCGCCAATCGGTCCTCGTTTGCAATCCCAATCCCGGTCT
CGATCTAGATCTCGGTCCCGGTCCCGGTCTCGGTCTCATTCCCGGTCCCGCTCGCCTCGC
AAATCGAGGTCTGCATCGCGTTCGAAGGCTTCGAAGTCGAGATCCAGGTCGAGTAACGAT
AAAAATCAGCCTCCAAGTAAGCCGGTGCCGCGCTACTATGGACGGAGGAAAGAAGATAAA
TCATCAAGTGAACTGTCGCTTGACTCAGACACAACTGATTCGGATGAAAACAATAAGTCA
GCGGGTGGCAAATCAAACCCTAACCAGAATCAGTTACGATTAACTGGATCCAGCTCCAAA
GTCAGGATTGTCGCGGGAAGCGTTAAGTATGAAGGAGAAATTAAAAAGAAAAATGCAGGC
ACAGCTATCAAGGCAGTGTGA
Protein sequence:
MWHEARKQERMIRGMIVDYRRRAERRKDFYEKIKAEPTQFLQLHGRQCKIHLDPAVAAAG
EGPAIMMPWQGDTNNMIDRFDVRAHLDIISEVKAPYIPPEDLNQEERQCNYERYRILAQN
AFLGISEDKFLQQLAIEEQFGVTIEEKEMQREKLSEKKGVGAAIGYNYNDPTVQPSTSNG
PEMKKADSKESDDDSDLEIIDVDLSIDVNKMDASQAHELNAVGPQYGMAGCDLFSFLTGD
ADDAEHQKQLLREEKEKAMFSGRKSRRERRAHRDKKLATRVVSPPSYAAAPSAPVAPSRS
PSRSRSRTPSPDNTNIQFITSFGPEDDDTAPLPNKPLYADKVKQNLKKGMSYSEIVKKSK
TLSSSFGAPIGPRLQSQSRSRSRSRSRSRSRSHSRSRSPRKSRSASRSKASKSRSRSSND
KNQPPSKPVPRYYGRRKEDKSSSELSLDSDTTDSDENNKSAGGKSNPNQNQLRLTGSSSK
VRIVAGSVKYEGEIKKKNAGTAIKAV