| Genomic Position | scaffold186:- 13727-18268 |
|---|---|
| See gene structure | |
| CDS Length | 1554 |
| Paired RNAseq reads | 8 |
| Single RNAseq reads | 41 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011163 (5e-18) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (0.0) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10020 |
Nucleotide sequence:
ATGGAAGAGAATAAGTCGCCTGGCAACATTACATTCACTGAAATAGCTGAAGTTGGCTTC
CAGCAAAATTGGTATCCTGAAAAGAGCGAAGCGGATCCTAGAGCCACATTAACACGCCAC
TTTTCCGAAGACCTGCCAGAAGTCAGCAATGGTGAAATCGAGATCGCTCTTGGGCAGCTA
AAAAATGGAAAAGCCCCTGGAGAAGACGGCATAACAACAGAATTGGTGAGTGCCGGAGGT
AAACCCGTACTGAGGGAGCTCCAAAAGCTGTTCAATTCTGTCCTCTTCGAAGGGAGAAAT
CAGGAGGCGTGGAGTAGGGGTGTGGTCATCCTGTTCTTCAAAAAGGGAGACAAATCCCTG
CTGAAGAACTATCGACCCATTTCCCTGCTAAGCCACGTCTATGAGCTGTTTTCAAGAGTG
ATCACAAATCGTCTTGCGCGAAGACTCGACGAATTCCAACCACCGGAACAGGCTGGGTTT
CGGAGCGGATACGGCACCATAGACCACATTCACACGGTGCGGCAGATTATACAGAAGACC
GAAGAGTATAATCAGCCCCTTTGTCTAGCATTCGTGGACTATGAGAAAGCTTTTGACTCG
ATTGAAACTTGGTCTGTTCTGGAGTCCCTGCAACGTTGCCAAGTTGATTGGCGGTATATC
CAAGTGATAAGATGTCTCTACGAAGCCGCCACCATGTCCGTCCAAGTACAGAATCAGCAA
ACAAGTCCCATACCGTTGCATCGAGGAGTGAGACAAGGGGACGTTATCTCCCCGAAATTG
TTCACAAATGCAATAGAGGATATGTTTAAGACGCTGCGCTGGAAAGACGAGGACCTACAA
CAGATGCTTGATGACCTGGCTGACTCTTCTATACGCATAGGCCTACGGATGAACTTGGAG
AAAACCAAGGTCATGTTCAATGAACATTTTCTACCGGAACCGATTGCAGTCCACGGTGTC
GTTCTCGAAGTTGTTCAAAAATATGTCTATCTGGGGCAAGTATTGCAGTTGGGTAGAAAC
AATTTCGAGGACGAGATGAGTAGAAGAGTTCAGCTGGGTTGGGCAGCGTTTGGGAAGTTA
CGCCGAGTCTTAACATCATCGATCCCACAATGCCTAAAGTCGAAAGTTTTCAATCAGTGC
GTCCTACCCGTAATGACTTACGGTGCCGAAACGTGGACACTAACGGTAAGGCTAGTTCAC
CAACTCAAAGTCGCTCAGCGGGCTATAGAAAGGGCTATGCTCGGCGTTTCTCTGAGGGAT
CGCATCAGAAATGAGGTGATTCGGCAGAGAACCAAAGTCATCGACATAGCCCACCGGATT
AGCAAACTGAAGTGGCAGTGGGCTGGCCATATTAGCCGCAGAACCGACAACCGTTGGGGT
AAACGAGTTTTTGAGTGGAGACCGCGTCTCGGCAAACGTAGTGTAGGACGTCCTCAGACA
AGGTGGAGTGACAATTTGCCCAAGATGGCTGGCAGGAGCTGGATGCGAGTAGCCGAAAAT
AGATTTAGTAGCGTGCAATTGGAGAGGCCTATGTTCAACAGTGGACCAATATAG
Protein sequence:
MEENKSPGNITFTEIAEVGFQQNWYPEKSEADPRATLTRHFSEDLPEVSNGEIEIALGQL
KNGKAPGEDGITTELVSAGGKPVLRELQKLFNSVLFEGRNQEAWSRGVVILFFKKGDKSL
LKNYRPISLLSHVYELFSRVITNRLARRLDEFQPPEQAGFRSGYGTIDHIHTVRQIIQKT
EEYNQPLCLAFVDYEKAFDSIETWSVLESLQRCQVDWRYIQVIRCLYEAATMSVQVQNQQ
TSPIPLHRGVRQGDVISPKLFTNAIEDMFKTLRWKDEDLQQMLDDLADSSIRIGLRMNLE
KTKVMFNEHFLPEPIAVHGVVLEVVQKYVYLGQVLQLGRNNFEDEMSRRVQLGWAAFGKL
RRVLTSSIPQCLKSKVFNQCVLPVMTYGAETWTLTVRLVHQLKVAQRAIERAMLGVSLRD
RIRNEVIRQRTKVIDIAHRISKLKWQWAGHISRRTDNRWGKRVFEWRPRLGKRSVGRPQT
RWSDNLPKMAGRSWMRVAENRFSSVQLERPMFNSGPI