New model in OGS2.0 | DPOGS205824  |
---|---|
Genomic Position | scaffold591:- 11054-21314 |
See gene structure | |
CDS Length | 2175 |
Paired RNAseq reads   | 1531 |
Single RNAseq reads   | 3926 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009312 (9e-30) |
Best Drosophila hit   | CG3973 (3e-36) |
Best Human hit | growth arrest-specific protein 2 (5e-32) |
Best NR hit (blastp)   | PREDICTED: similar to growth arrest-specific 2 [Tribolium castaneum] (5e-107) |
Best NR hit (blastx)   | PREDICTED: similar to growth arrest-specific 2 [Tribolium castaneum] (2e-99) |
GeneOntology terms    | GO:0007050 cell cycle arrest GO:0015629 actin cytoskeleton GO:0045746 negative regulation of Notch signaling pathway GO:0005881 cytoplasmic microtubule GO:0030713 ovarian follicle cell stalk formation GO:0030707 ovarian follicle cell development |
InterPro families    | IPR001715 Calponin homology domain IPR003108 Growth-arrest-specific protein 2 domain |
Orthology group | MCL17647 |
Nucleotide sequence:
ATGGCGTACTACCGCTGTGGACCGACTGCTATCGGCAGCCGCGCGTCGTGGTCGGTGACG
ACTCCCGAGAGCAAACCCTTCGAGCGTCCTCTCAGCGGGAACTACGACAGGATCTTCAAC
GCCTTCGAGAGAACAAACGCCTTCGAGTACGTCAGGAGCACCTTCGAAGGGAAACCAGAA
GAGAGGCATGTTGGACACGGAGACGTAGTGGTTAATAGGAAGATGTCCAGTAGCTTTGAA
CGAGCGGACTGCGCCCTGGCCGCGCAGACGCCTTGCTCTGACGATGAGGACTTTTATAGG
GAGAAGATATTGTACTCGCAAACCAGGCAGCTGTTTCCTCTGCAAGAAGATTTGGCTGAT
TGGATCAATAAAACTATAGGCATCACCTACCTGAACGGGGAGAACTTCCTGGACGTGTTG
GACAACGGCGCGGAACTGTGTCAGCTGGCGGTGGTGATACACGAGCGAGCGAGGGAAGCG
CTCCACCAGGGACTCATAGTCGGACCGGTGCCAGCGATCCGCGGGCGCTGCTGGCAGCGA
GCAGCTCGTCGCAGTTTCTTCTCACGCGACAACGCGGAGAACTTCATCACCTTCTGCAGA
GAGCTCGGTGTACATGAGAATCTGCTGTTCGAGAGCGATGACCTGGTGTTACACAACCAA
CCGCGACAAGTCATCCTGTGTCTACTAGAGGTGGCCCGGCTCGCGACCAGGTTCAACGTG
GAACCTCCGGGGCTGGTACAGCTCGAGAAGGAGATTGCCTTGGAAGAACGCGATTCCGGA
CTAGACTCCGCTATGTCGGGGGCAGCCTGGCAGTTCAGAGACAGCTCACCCTCGCCTATC
AGAGACAAGTCTAAGAAAGAAGACGCTGTTTTATCGCTAGAACCAAATGATTCTCGTCCT
TCGCTGCAGGACAACACCGACGCAGAGAGCACGAGATCCGTGGACACCGAGTCTAGCTCT
GATACCGACGTTCCGCTAAGACCGACCAACGAACTGGACAAGAGGGTACAACTCGTTACG
CGTCTGATGGAGCGAGGATGCAACTGCGGCTCAGGAAAATGTTCCAAGCTCCTGAAGGTG
AAAAAAGTCGGCGAAGGGAGATACAACATCGCTGGAAGGAACGTCTTTATTAGATTACTT
AAAGGACGCCACATGATGGTACGTGTGGGCGGGGGGTGGGACACCCTCGAGCACTTCCTC
TCGCGTCATGAGCCTTGTCAGGTGCGCCTCGTGACGCAGGGCCGGCGTGACGTGCTTCCT
GTGCCGCTGCCCCCCTCCCCTTCTCCGGCGCATTCACACTCACCTAGTCCCTCTCCTCTC
CCAGCCTCCGCCGGGCCTTCTCCAGCCCACGCTGGCCCATCACCTGCACCCAGCAGCACC
TCTCTTGCCGGCACCGTCTCTCCCATCGACAGCAAGGCATCATCTATTAGCGGCAAAACC
TCTCCCGTTGATCCTAAGCTCGATAAAACTCGAACTCCTGGCAAGCCCGATAGCGGAAAG
TGCTCCCCGCTCCGCCGCACTTCTACACCCAATAAACCAGTTTCATCCAGGAACAGATCT
GCCTTGACACTGCCCCTCAAAGATTCGACCGAAAAGAAGTCCCCAGCACCCCGAGCTAGA
AAGCAATCCGCACCAGCTAGCTTCAGCACTCCGAACACGCCGACCGGAAGGTCCATCCGG
ACTCCTCCCGTCGAACTTCGCAAGTCGCTCACTTCAAACACATTAATAAACGCACCTAAA
AAATCGAGAAGCATGAGTCTAGCGAGCGCCCCCAACAATGAAAGGAAATCATTTTGTGGG
ACGGATAAACTGAATCAGTCCAAGAAGACCCGCAGCATGAGCGGCGCCAGTACCCCCAGT
GAGTCGTCGGTGGCGCGCCCCACTCGCAGCCAGAGCCTCGCGTCTACCCCCGTCAATGGC
CCCAAGAAACCTTTGGCCAATAGCTTCGCTAAGAAGACTCGGAGCATGAGCCTGGCGACG
CCCATAGATTTCTCGAAACCGCTCACAAAGAGCGCTTCCATTGGTGCGACCGGACTCACT
CAGGCCGCCATCGAAGAGAGCATCCGCTTGTCACTGGAGGCCAGCATAGCCGACAATACC
TCCCCGAAAAAGCCATTTTTGCATATCAAAGCCAAATATCGTAGTCCGCCGCCGCGGGAG
GTTCCCCCGAGATAA
Protein sequence:
MAYYRCGPTAIGSRASWSVTTPESKPFERPLSGNYDRIFNAFERTNAFEYVRSTFEGKPE
ERHVGHGDVVVNRKMSSSFERADCALAAQTPCSDDEDFYREKILYSQTRQLFPLQEDLAD
WINKTIGITYLNGENFLDVLDNGAELCQLAVVIHERAREALHQGLIVGPVPAIRGRCWQR
AARRSFFSRDNAENFITFCRELGVHENLLFESDDLVLHNQPRQVILCLLEVARLATRFNV
EPPGLVQLEKEIALEERDSGLDSAMSGAAWQFRDSSPSPIRDKSKKEDAVLSLEPNDSRP
SLQDNTDAESTRSVDTESSSDTDVPLRPTNELDKRVQLVTRLMERGCNCGSGKCSKLLKV
KKVGEGRYNIAGRNVFIRLLKGRHMMVRVGGGWDTLEHFLSRHEPCQVRLVTQGRRDVLP
VPLPPSPSPAHSHSPSPSPLPASAGPSPAHAGPSPAPSSTSLAGTVSPIDSKASSISGKT
SPVDPKLDKTRTPGKPDSGKCSPLRRTSTPNKPVSSRNRSALTLPLKDSTEKKSPAPRAR
KQSAPASFSTPNTPTGRSIRTPPVELRKSLTSNTLINAPKKSRSMSLASAPNNERKSFCG
TDKLNQSKKTRSMSGASTPSESSVARPTRSQSLASTPVNGPKKPLANSFAKKTRSMSLAT
PIDFSKPLTKSASIGATGLTQAAIEESIRLSLEASIADNTSPKKPFLHIKAKYRSPPPRE
VPPR