| New model in OGS2.0 | DPOGS204522 |
|---|---|
| Genomic Position | scaffold3926:+ 3758-10209 |
| See gene structure | |
| CDS Length | 1536 |
| Paired RNAseq reads | 35 |
| Single RNAseq reads | 92 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004298 (2e-96) |
| Best Drosophila hit | CG6752 (2e-51) |
| Best Human hit | E3 ubiquitin-protein ligase RNF123 (3e-55) |
| Best NR hit (blastp) | PREDICTED: similar to CG6752-PA [Apis mellifera] (1e-72) |
| Best NR hit (blastx) | PREDICTED: similar to CG6752-PA [Apis mellifera] (3e-64) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0005737 cytoplasm GO:0046872 metal ion binding GO:0005575 cellular_component GO:0003674 molecular_function GO:0016874 ligase activity GO:0005515 protein binding GO:0008150 biological_process |
| InterPro families | IPR008985 Concanavalin A-like lectin/glucanase IPR003877 SPla/RYanodine receptor SPRY IPR001870 B302/SPRY domain IPR018355 SPla/RYanodine receptor subgroup |
| Orthology group | MCL10888 |
Nucleotide sequence:
ATGATGAACGTCCTCCGATCTATGTTCGGGGTGTGCAGCAGTTCTGCTGAGAAGGGTGAA
GTACACGACACCATACGAAGGGTGTTTGGCAACGAGCTTGTGATGAAGGACAACACTGAT
AAACATAATCAGCGAAGTAAATATGTAAGTCACGTTCGAGACAACCTATCAAAAGTGCTA
GACGCGAAAGTAACGAGTCACAAGACGAAATCCACGAAGAAGCATCCCGTTGTTACTCCA
TCAGAGAACACGGAATCCACAGATGACAGACCGGGTAGGATCGGACCTAAGCTAGTTGTA
TTCGATGCCTCAACAGGTACAGGAAGATTAGTTCTGGTAGGAGATGAGCGTGTCAGCGTG
CAGGGTCTCTCAAGTTTTGCGACGATACGAGCCACAGCCTGCGTATATTCGGGCAAGTGG
ATGTACGAGGTGCAGCTCGGAACTAAGGGCATTATGCAGGTCGGCTGGTGTACTGCAACT
TGTACTTTCTCAATGGACACAGGAGTTGGGGACACTGCACACTCATATGCCTACGATGGA
GGCAGGGTTAGGAAATGGAATGTCGCCACCTCTCAATACGGTCAAGCTTGGCTGCCAGGT
GACGTCATCGCTTCCTGTATAGACCTGGATAAAGGGACCTTGGAGTATTACAGAAATGGC
GTATCCCTTGGCATGGCATTTAATAGAGTAACCCGTGGCTCCGGGTTGGCGTATTTCCCT
GCAGTGTCCTTAGCTATGCAGGAACATCTATACGCTAATTTCGGACATGTACCTTTCATT
TTTCCGGTAGAGGGCTTCTCTCCGCTACAAGCGCCCCCTACAAAGGACTGCCTACGTGCG
AGCATCTTATTCAAATCACTAGATGCTTTGCTTGATGAATTGAGCAAAATTTCCGATCTC
AAAACCTCTGTATCTGCCAAAAGTAGCAAGGCTAAATCGATTTCATCCAAGGCTGAAGAA
GAAGTTGCTCTCCGTATCCACAGTTCCAGTTCTGTGTATAGTCCAAGAGCCTCACCACAC
AGCATGGTTGTAGCACAGAGCGCTGAAATGAAGAAAATGTCCAAAAAGGCATTTCTAATG
TCTCTCGCGCGCTTGGTCGTATCAGAGCTTGGCACAGTTCTTCGGGTGTCATATGTAGTA
GTCTCTGAACTGCTTCCCAGATTTAGAGGATCTCTCGGCTTGAAGTCAAAAGTCATGCAC
CCGGAGCCAAGTGCTGTGGATTTCTATCAGAAAGCTAAAGAGGAGAAATTTAATGGATTG
GCACGAAAATTTCTTAGTCAGCCGCAGCCACGTCTCTGTTTACTTCTGGACCTTCTGTGG
ACTTTTCTAGAAGAAGCTGCTCTTTGTGATGTTCTGGAACATTGCGTCGTTAGGGAATGC
CTGATGTACGACTTAGTATCACCGTCGAGGTCCGGGCTCTTAGAGGCCTCGGGACGGCTA
TTATCTTCGGGACCTTCAGGACAGAATCTCAAGGGTAGACCGCGCTGTCTCCCTAGCTAC
GCTTTCAAAGCAAATAGGGCTAATAGCATTAGATAA
Protein sequence:
MMNVLRSMFGVCSSSAEKGEVHDTIRRVFGNELVMKDNTDKHNQRSKYVSHVRDNLSKVL
DAKVTSHKTKSTKKHPVVTPSENTESTDDRPGRIGPKLVVFDASTGTGRLVLVGDERVSV
QGLSSFATIRATACVYSGKWMYEVQLGTKGIMQVGWCTATCTFSMDTGVGDTAHSYAYDG
GRVRKWNVATSQYGQAWLPGDVIASCIDLDKGTLEYYRNGVSLGMAFNRVTRGSGLAYFP
AVSLAMQEHLYANFGHVPFIFPVEGFSPLQAPPTKDCLRASILFKSLDALLDELSKISDL
KTSVSAKSSKAKSISSKAEEEVALRIHSSSSVYSPRASPHSMVVAQSAEMKKMSKKAFLM
SLARLVVSELGTVLRVSYVVVSELLPRFRGSLGLKSKVMHPEPSAVDFYQKAKEEKFNGL
ARKFLSQPQPRLCLLLDLLWTFLEEAALCDVLEHCVVRECLMYDLVSPSRSGLLEASGRL
LSSGPSGQNLKGRPRCLPSYAFKANRANSIR