| New model in OGS2.0 | DPOGS209347 |
|---|---|
| Genomic Position | scaffold462:- 15117-22539 |
| See gene structure | |
| CDS Length | 1473 |
| Paired RNAseq reads | 12882 |
| Single RNAseq reads | 41335 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014446 (3e-127) |
| Best Drosophila hit | ATP citrate lyase, isoform F (3e-160) |
| Best Human hit | ATP-citrate synthase isoform 2 (2e-153) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC015096 [Tribolium castaneum] (2e-176) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC015096 [Tribolium castaneum] (6e-171) |
| GeneOntology terms | GO:0006101 citrate metabolic process GO:0003878 ATP citrate synthase activity GO:0005737 cytoplasm GO:0006085 acetyl-CoA biosynthetic process GO:0004775 succinate-CoA ligase (ADP-forming) activity GO:0005524 ATP binding GO:0044262 cellular carbohydrate metabolic process GO:0005811 lipid particle |
| InterPro families | IPR016102 Succinyl-CoA synthetase-like IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type IPR013816 ATP-grasp fold, subdomain 2 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site |
| Orthology group | MCL11862 |
Nucleotide sequence:
ATGAAAATTGGCGAAGAGCAACTAGTGGTGAAGCCCGACCAGCTGATCAAGAGACGAGGC
AAGTTGGGACTGGTTGGTGTGAATAAAACGGCGGCGGAGGTCAGGCGCTGGCTGGCCGAG
CATGACTCCAAGGAGCAGAAGGTCGGAGCGGCCGCGGGGAAGCTCAGGAGATTCGTGGTG
GAACCGTTCGTGAAGCACGATCCGAGCGAGGAGATGTACCTGTGCATCCAATCAGGCCGA
CGAGCGGACACCATCATGTTCCATCACCAGGGCGGAGTGGACGTGGGTGATGTGGACGCG
CTGGCTCTCAGGATGGATTTAGGTCTTTGTATGGACAGAAACTTATCTGAACTGGTTGAA
TATGCTCACACCAGGTTACGGATCCTGTCAAAGTTCATCGTGAGCCTGTACCGCGTGTTC
GTGAACCTGTACTTCACGTACATGGAGATCAACCCGGTGGTGGTGACCAACGAGCGAGTC
TACCTCCTTGACCTGGCCGCCAAGTTGGATCAGACGGCGGATTTCATATGCGCCAAGAAC
TGGGGGGAGATCACCTTCCCCCCGCCCTTCGGCAGGGACGCGTACCCCGAGGAAGCTCAT
ATAGCTGATCTTGACGCTAAGAGCGGGGCTAGCTTGAAGCTGACGGTGCTGAACAAGTCC
GGGCGTATCTGGACGATGGTGGCGGGCGGCGGGGCGTCCGTGGTGTACACGGACACGGTC
TGCGCCCTGGGCGGGGCGGCCGAGCTCGCCAACTACGGCGAGTACTCCGGGGCGCCCACC
GAGAGCCAGACAGCCGACTACGCCAAGACCATATTCAGTCTCATGTGCAGAGAGAAGCAT
CCCAAGGGCAAGGTCCTGATTATCGGCGGCGGCATCGCGAACTTCACGAACGTGGCGGAC
ACCTTCCGCGGCATCATCACCGCCATCGAGACGTACCGGGACGCTCTGCTTCAGTACAAC
GTCACCATCTTCGTGAGGCGGGGCGGCCCCAACTACCAGGAAGGGCTGAGACAAATGCGT
GAAGTGGGGCAGCGTCTCCGTATCCCCATGTACGTGTTCGGTCCGGAGAGCAACATGACC
GCCATCGTGAGGCTGGCTCTGGGACACGCGGTCATACCCAGCGACCACCAGCTCGACTAC
GCCCCGAAACAGCTGCCCAAGCCGGACACCGCTCCGTCCCCGCAGATCGAGCTTCCAGAG
CTGAGCCCGTCCCTGCTGGAGCTGGTGTGCTCGCAGGCGCCCACCAGGAGCGACCTCGGC
CAGCAGCTGTCCACAGCCAGGCCGCTGTTCAGTGACAGGACCAAGGCTATAGTGTGGGGA
ATGCAGAACAGAGCTATACAGGGTATGCTCGACTTCGACTACGTGTGTCGCCGCAGTGAG
CCGTCAGTGGTGGCCATAGTGTACCCCTTCACCGCTGACCACAAACAGAAGTACTACTTC
GGCACTAAGGAACACAAATATGGGCCACTCTAA
Protein sequence:
MKIGEEQLVVKPDQLIKRRGKLGLVGVNKTAAEVRRWLAEHDSKEQKVGAAAGKLRRFVV
EPFVKHDPSEEMYLCIQSGRRADTIMFHHQGGVDVGDVDALALRMDLGLCMDRNLSELVE
YAHTRLRILSKFIVSLYRVFVNLYFTYMEINPVVVTNERVYLLDLAAKLDQTADFICAKN
WGEITFPPPFGRDAYPEEAHIADLDAKSGASLKLTVLNKSGRIWTMVAGGGASVVYTDTV
CALGGAAELANYGEYSGAPTESQTADYAKTIFSLMCREKHPKGKVLIIGGGIANFTNVAD
TFRGIITAIETYRDALLQYNVTIFVRRGGPNYQEGLRQMREVGQRLRIPMYVFGPESNMT
AIVRLALGHAVIPSDHQLDYAPKQLPKPDTAPSPQIELPELSPSLLELVCSQAPTRSDLG
QQLSTARPLFSDRTKAIVWGMQNRAIQGMLDFDYVCRRSEPSVVAIVYPFTADHKQKYYF
GTKEHKYGPL