New model in OGS2.0 | DPOGS201725  |
---|---|
Genomic Position | scaffold5442:- 1227-5104 |
See gene structure | |
CDS Length | 957 |
Paired RNAseq reads   | 349 |
Single RNAseq reads   | 869 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000186 (3e-107) |
Best Drosophila hit   | CG4973 (1e-90) |
Best Human hit | RING finger protein 113A (2e-86) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP007068-PA [Tribolium castaneum] (2e-108) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP007068-PA [Tribolium castaneum] (6e-104) |
GeneOntology terms    | GO:0003676 nucleic acid binding GO:0008270 zinc ion binding GO:0005515 protein binding |
InterPro families    | IPR000571 Zinc finger, CCCH-type IPR018957 Zinc finger, C3HC4 RING-type IPR001841 Zinc finger, RING-type IPR013083 Zinc finger, RING/FYVE/PHD-type IPR017907 Zinc finger, RING-type, conserved site |
Orthology group | MCL14119 |
Nucleotide sequence:
ATGTCAGACGTGGAAGTTGAAGTTCCTTGTACGTTCAAAAAACGTAACTTAAAATGCAAA
GGTGGAAGAAAACGAAAAACCTCATCAAGTTCAGAAGAGAAGAACAGTTCAGAAGCAGAT
GAACCCACGGTCGTGTTGCCAACAAAGCGAGCTCAGAAAGCGAACCCCAACATACAAAGC
ACTGGCGGCCAGAAGAAACAAAGGGTGGAAATAGAGGACGAGCTCAGCAGTGACGATGAA
AAGCAACAACCGAATACAACGCTGTCAGTACAACAACAACGGGAGAATGCCACGGCCACA
TATGAACTTGATACAGAGAAAGACAAAGATGCTCAGGCAATATTTGAGAAGGCCCAAAAA
ATAAACGAGGAGCTCAAAGGACAGGCTGATGATAAGGTGTACCGTGGCATAAATAACTAT
GCCCAGTATTATAAGAAACGAGACACAGCGGCTGGGAACGCTAGCTCTGGTTTGGTTAGA
AAGGGTCCCATCAGGGCGCCCGCTAACTTGAGAGCCACGGTCAGGTGGGACTATCAGCCG
GATATTTGCAAGGATTACAAGGAGACTGGCTTCTGTGGTTTCGGAGACTCCTGCAAGTTC
CTCCACGACAGATCAGATTACAAGCACGGCTGGCAGCTGGAGAGAGAGGAAACGGAACAG
AAGGCTGGTGATTCAGACTATGAGATCCACAGCGATGAAGAGTTACCTTTCAAATGTTTT
ATATGCCGAGAGAGCTTTAAGGACCCCGTGGTTACGAGATGCAAGCACTATTTTTGCGAG
AAATGCGCGTTAGCACAATACAAGAAGTCGACCCGCTGCTTCGTGTGTAACGCCCAGACT
AGTGGCGTGTTCAATCCCGCCAAGGAGTTGGAGGCGAAGCTGAACGAACGGAACAGTGAT
GACGGTGACAGTGATGCTGATGATGATGATGATGATGATGAACATAACAATAAATGA
Protein sequence:
MSDVEVEVPCTFKKRNLKCKGGRKRKTSSSSEEKNSSEADEPTVVLPTKRAQKANPNIQS
TGGQKKQRVEIEDELSSDDEKQQPNTTLSVQQQRENATATYELDTEKDKDAQAIFEKAQK
INEELKGQADDKVYRGINNYAQYYKKRDTAAGNASSGLVRKGPIRAPANLRATVRWDYQP
DICKDYKETGFCGFGDSCKFLHDRSDYKHGWQLEREETEQKAGDSDYEIHSDEELPFKCF
ICRESFKDPVVTRCKHYFCEKCALAQYKKSTRCFVCNAQTSGVFNPAKELEAKLNERNSD
DGDSDADDDDDDDEHNNK