DPGLEAN18928 in OGS1.0

Genomic Positionscaffold47208:+ 921-4434
See gene structure
CDS Length1953
Paired RNAseq reads  18461
Single RNAseq reads  49008
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA002383 (7e-06)
Best Drosophila hit  nimrod B2 (3e-36)
Best Human hittenascin-X isoform 1 precursor (2e-06)
Best NR hit (blastp)  nimrod B [Bombyx mori] (5e-64)
Best NR hit (blastx)  nimrod B [Bombyx mori] (4e-73)
GeneOntology terms
  
GO:0007498 mesoderm development
GO:0005576 extracellular region
InterPro families
  
IPR009030 Growth factor, receptor
IPR006210 Epidermal growth factor-like
Orthology groupMCL21709

Nucleotide sequence:

CCGCAAGTCACACACGATAACAATATAATCGGTGTGATGTATTTGTTTTTTCTCGGGGTT
CTGTTGCTGGGCTGCGTAAACGCGAATAATGATGCCGAATATGTAAATGTTAAATCCGTC
AAAGGTGGTCATCGGGGCTTTCATTACAACCCAACAGCCAACTACCCCAACTTCTACAAT
GGCAGCAGAGGTCAGTACGGCGGATATGACATGCGTTACAACATGACACACGGTTATGGG
TCCCTCAACACAACTGCCATACGCCGAGTTGACTATGAAGTCGGTGTTTGCTACATTGAA
GTACCAACTGCCACCTTAGTGCGTAATCCAGCTCAAGTTCCTATGGGCAATGGTTCGCGA
CCTGACCTCAGCCGTATCAGAAGCTGTTGTAAAGGCTACATACGAAACATCCACAACTCT
CAAATTTGTGATCCAATATGCTCCAAGGAATGCGTCAATGCGCTTTGTACTGCACCCGAG
ACATGCTCGTGTTTCCCTGATCATGTTAAAAATTTGGCTGGATTTTGCATACCCATTTGC
CCTATAGGATGCCAGAACGGTCATTGCAGTGGTGGTGAGTGTTTGTGCAAGCCCGGCTTT
AAATTGGACTCCGAAAGCAAGTATTGTATTCCAACTTGCAGAGAAAACTGTGGAGGTATA
GGTAATTGTACCAACTTGAATGTTTGTGAATGCAAGTCCGGCTACCAATCTACCCCCGAG
GGTAATTGCAGGCCTGTTTGTAGTAAATGCAACGGCGATTGTGTTGCGCCCAACGACTGT
CGGTGCAAGCCTGGCTATGCATTAGATCAACAAGGCCAATGTACTCCACAATGTCCTCAG
GGATGTGGACCCAACAGCCGATGCATTAGTCCGAATGTTTGCGACCAAAATGGATCTGTT
CAACCACACCAACCCGGAAACCTTTACCCATTGTATCCTGGACAACAGATAAATAAAACA
GTGCCCGCAAACAACACATATCCAGTACTCATTCAGGTCACGATGGCATTCAAAAACCTT
CAGGTTATCAACCAGGACAGCAGGGATACCCAGGAATGTCTCAATATCCAAATCCGAATG
GGCAAAACAGATACCCCAACCAACCAGGTTCCAATGAAAAACCTGAATATCGACCAATAC
CTCAACGTCCAGGCCAATCTGGCTATCAACCAGGGCAGCAAAGATACCCTGGACAATCTG
GGTATCCTGGACAGTCTGGATATCCTGGACAATCTGAATATCCTGGACAGTCTGGATATC
CTGAACAATCTGGATCTCCTGGACAATCTGAGTCTCCTGGACAATCTGGGTCTCCTGGAC
AATCTGGGTCTCCTGGACAGTCTGGGTCTCCTGGACAATCTGGGTCTCCTGGACAGTCTG
GGTCTCCTGGACAATCTGGGTCTCCTGGACAGTCTGGGTCTCCTGGACAATCTGGGTCTC
CTGGACAGTCTGGGTCTCCTGGACAATCTGGGTCTCCTGGACAGTCTGGGTCTCCTGGAC
AATCTGGGTCTCCTGGACAGTCTGGGTCTCCTGGACAATCTGGGTCTCCTGGACAGTCTG
GATATCCTGGACAGTCTGGATATCCTGGACAGTCTGGATACCCTGGACAGTCTGGATACC
CTGGACAGTCTGGATATCCTGGACAGCCTGGATATCCCGGACTGTACCCAGGACAACCCG
GATATCCCGGGCAGTACCCAGGACAACCCGGATATCCTGGGCAATATGAAAATCCACGAC
AATATGAATTTCCAAGGCAACCCGAACCTTTCTTATACCCTGATCAACCAGGATACCGCC
CTGGCTATCCGGGACCATCTAGACCTGGGCCTCAAGAAAACCCTAGGCAATCTGAATATC
CTGACCTACCTGGTTATAGGTTACCTTCTGGATATCCCGTGTCAGCTGATCAACGACATC
CTAATAACCAAAATCAAACCTCTTACCCCATAA

Protein sequence:

PQVTHDNNIIGVMYLFFLGVLLLGCVNANNDAEYVNVKSVKGGHRGFHYNPTANYPNFYN
GSRGQYGGYDMRYNMTHGYGSLNTTAIRRVDYEVGVCYIEVPTATLVRNPAQVPMGNGSR
PDLSRIRSCCKGYIRNIHNSQICDPICSKECVNALCTAPETCSCFPDHVKNLAGFCIPIC
PIGCQNGHCSGGECLCKPGFKLDSESKYCIPTCRENCGGIGNCTNLNVCECKSGYQSTPE
GNCRPVCSKCNGDCVAPNDCRCKPGYALDQQGQCTPQCPQGCGPNSRCISPNVCDQNGSV
QPHQPGNLYPLYPGQQINKTVPANNTYPVLIQVTMAFKNLQVINQDSRDTQECLNIQIRM
GKTDTPTNQVPMKNLNIDQYLNVQANLAINQGSKDTLDNLGILDSLDILDNLNILDSLDI
LNNLDLLDNLSLLDNLGLLDNLGLLDSLGLLDNLGLLDSLGLLDNLGLLDSLGLLDNLGL
LDSLGLLDNLGLLDSLGLLDNLGLLDSLGLLDNLGLLDSLDILDSLDILDSLDTLDSLDT
LDSLDILDSLDIPDCTQDNPDIPGSTQDNPDILGNMKIHDNMNFQGNPNLSYTLINQDTA
LAIRDHLDLGLKKTLGNLNILTYLVIGYLLDIPCQLINDILITKIKPLTP