Genomic Position | scaffold47208:+ 921-4434 |
---|---|
See gene structure | |
CDS Length | 1953 |
Paired RNAseq reads   | 18461 |
Single RNAseq reads   | 49008 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002383 (7e-06) |
Best Drosophila hit   | nimrod B2 (3e-36) |
Best Human hit | tenascin-X isoform 1 precursor (2e-06) |
Best NR hit (blastp)   | nimrod B [Bombyx mori] (5e-64) |
Best NR hit (blastx)   | nimrod B [Bombyx mori] (4e-73) |
GeneOntology terms    | GO:0007498 mesoderm development GO:0005576 extracellular region |
InterPro families    | IPR009030 Growth factor, receptor IPR006210 Epidermal growth factor-like |
Orthology group | MCL21709 |
Nucleotide sequence:
CCGCAAGTCACACACGATAACAATATAATCGGTGTGATGTATTTGTTTTTTCTCGGGGTT
CTGTTGCTGGGCTGCGTAAACGCGAATAATGATGCCGAATATGTAAATGTTAAATCCGTC
AAAGGTGGTCATCGGGGCTTTCATTACAACCCAACAGCCAACTACCCCAACTTCTACAAT
GGCAGCAGAGGTCAGTACGGCGGATATGACATGCGTTACAACATGACACACGGTTATGGG
TCCCTCAACACAACTGCCATACGCCGAGTTGACTATGAAGTCGGTGTTTGCTACATTGAA
GTACCAACTGCCACCTTAGTGCGTAATCCAGCTCAAGTTCCTATGGGCAATGGTTCGCGA
CCTGACCTCAGCCGTATCAGAAGCTGTTGTAAAGGCTACATACGAAACATCCACAACTCT
CAAATTTGTGATCCAATATGCTCCAAGGAATGCGTCAATGCGCTTTGTACTGCACCCGAG
ACATGCTCGTGTTTCCCTGATCATGTTAAAAATTTGGCTGGATTTTGCATACCCATTTGC
CCTATAGGATGCCAGAACGGTCATTGCAGTGGTGGTGAGTGTTTGTGCAAGCCCGGCTTT
AAATTGGACTCCGAAAGCAAGTATTGTATTCCAACTTGCAGAGAAAACTGTGGAGGTATA
GGTAATTGTACCAACTTGAATGTTTGTGAATGCAAGTCCGGCTACCAATCTACCCCCGAG
GGTAATTGCAGGCCTGTTTGTAGTAAATGCAACGGCGATTGTGTTGCGCCCAACGACTGT
CGGTGCAAGCCTGGCTATGCATTAGATCAACAAGGCCAATGTACTCCACAATGTCCTCAG
GGATGTGGACCCAACAGCCGATGCATTAGTCCGAATGTTTGCGACCAAAATGGATCTGTT
CAACCACACCAACCCGGAAACCTTTACCCATTGTATCCTGGACAACAGATAAATAAAACA
GTGCCCGCAAACAACACATATCCAGTACTCATTCAGGTCACGATGGCATTCAAAAACCTT
CAGGTTATCAACCAGGACAGCAGGGATACCCAGGAATGTCTCAATATCCAAATCCGAATG
GGCAAAACAGATACCCCAACCAACCAGGTTCCAATGAAAAACCTGAATATCGACCAATAC
CTCAACGTCCAGGCCAATCTGGCTATCAACCAGGGCAGCAAAGATACCCTGGACAATCTG
GGTATCCTGGACAGTCTGGATATCCTGGACAATCTGAATATCCTGGACAGTCTGGATATC
CTGAACAATCTGGATCTCCTGGACAATCTGAGTCTCCTGGACAATCTGGGTCTCCTGGAC
AATCTGGGTCTCCTGGACAGTCTGGGTCTCCTGGACAATCTGGGTCTCCTGGACAGTCTG
GGTCTCCTGGACAATCTGGGTCTCCTGGACAGTCTGGGTCTCCTGGACAATCTGGGTCTC
CTGGACAGTCTGGGTCTCCTGGACAATCTGGGTCTCCTGGACAGTCTGGGTCTCCTGGAC
AATCTGGGTCTCCTGGACAGTCTGGGTCTCCTGGACAATCTGGGTCTCCTGGACAGTCTG
GATATCCTGGACAGTCTGGATATCCTGGACAGTCTGGATACCCTGGACAGTCTGGATACC
CTGGACAGTCTGGATATCCTGGACAGCCTGGATATCCCGGACTGTACCCAGGACAACCCG
GATATCCCGGGCAGTACCCAGGACAACCCGGATATCCTGGGCAATATGAAAATCCACGAC
AATATGAATTTCCAAGGCAACCCGAACCTTTCTTATACCCTGATCAACCAGGATACCGCC
CTGGCTATCCGGGACCATCTAGACCTGGGCCTCAAGAAAACCCTAGGCAATCTGAATATC
CTGACCTACCTGGTTATAGGTTACCTTCTGGATATCCCGTGTCAGCTGATCAACGACATC
CTAATAACCAAAATCAAACCTCTTACCCCATAA
Protein sequence:
PQVTHDNNIIGVMYLFFLGVLLLGCVNANNDAEYVNVKSVKGGHRGFHYNPTANYPNFYN
GSRGQYGGYDMRYNMTHGYGSLNTTAIRRVDYEVGVCYIEVPTATLVRNPAQVPMGNGSR
PDLSRIRSCCKGYIRNIHNSQICDPICSKECVNALCTAPETCSCFPDHVKNLAGFCIPIC
PIGCQNGHCSGGECLCKPGFKLDSESKYCIPTCRENCGGIGNCTNLNVCECKSGYQSTPE
GNCRPVCSKCNGDCVAPNDCRCKPGYALDQQGQCTPQCPQGCGPNSRCISPNVCDQNGSV
QPHQPGNLYPLYPGQQINKTVPANNTYPVLIQVTMAFKNLQVINQDSRDTQECLNIQIRM
GKTDTPTNQVPMKNLNIDQYLNVQANLAINQGSKDTLDNLGILDSLDILDNLNILDSLDI
LNNLDLLDNLSLLDNLGLLDNLGLLDSLGLLDNLGLLDSLGLLDNLGLLDSLGLLDNLGL
LDSLGLLDNLGLLDSLGLLDNLGLLDSLGLLDNLGLLDSLDILDSLDILDSLDTLDSLDT
LDSLDILDSLDIPDCTQDNPDIPGSTQDNPDILGNMKIHDNMNFQGNPNLSYTLINQDTA
LAIRDHLDLGLKKTLGNLNILTYLVIGYLLDIPCQLINDILITKIKPLTP