| New model in OGS2.0 | DPOGS214612 |
|---|---|
| Genomic Position | scaffold1724:- 7112-15247 |
| See gene structure | |
| CDS Length | 1458 |
| Paired RNAseq reads | 5191 |
| Single RNAseq reads | 11793 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001765 (1e-111) |
| Best Drosophila hit | cap-n-collar, isoform C (2e-60) |
| Best Human hit | nuclear factor erythroid 2-related factor 1 (4e-35) |
| Best NR hit (blastp) | cap-n-collar [Tribolium castaneum] (8e-92) |
| Best NR hit (blastx) | conserved hypothetical protein [Pediculus humanus corporis] (3e-78) |
| GeneOntology terms | GO:0005634 nucleus GO:0003702 RNA polymerase II transcription factor activity GO:0003677 DNA binding GO:0016563 transcription activator activity GO:0007350 blastoderm segmentation GO:0007310 oocyte dorsal/ventral axis specification GO:0008359 regulation of bicoid mRNA localization GO:0042070 maintenance of oocyte nucleus location involved in oocyte dorsal/ventral axis specification GO:0003700 sequence-specific DNA binding transcription factor activity GO:0008103 oocyte microtubule cytoskeleton polarization GO:0007317 regulation of pole plasm oskar mRNA localization GO:0046982 protein heterodimerization activity GO:0045450 bicoid mRNA localization GO:0045451 pole plasm oskar mRNA localization GO:0046983 protein dimerization activity GO:0006355 regulation of transcription, DNA-dependent GO:0043565 sequence-specific DNA binding |
| InterPro families | IPR004827 Basic-leucine zipper (bZIP) transcription factor IPR008917 Eukaryotic transcription factor, Skn-1-like, DNA-binding |
| Orthology group | MCL15023 |
Nucleotide sequence:
ATGTCCAGCAGCGCCATCTATCTTGTTCCACTGGATATCATCGCCCACGGAGGGGCGGGT
TACGCTCCAAACTACCACGCCCCCATACCACCTATACCGGAAAAACATCACGAGGCTTAC
GGTGCCCCAGCGCCGCTGGACGGAGCGTATAAGGTAGAAGCAGCCCATCACCCGCAGCAG
CACGATGGACTGTACTATCAGACACCTACGGAACCACAGCAAGACGGCTTCCTCCAGTCC
ATCCTGAACGACGAGGATCTCCAGCTGATGGATATGGCGATGAATGAGGGCATGTACACG
ATGCGGATGTTGGACGGCGCGCCCACGGTGCACCAGACACACGCGCACATGCCCGTGGCG
GCCGAACGTGATTCGGCATCAGACAGCGCTGTGTCGTCCATGGGCTCGGAGCGCGTACCC
TCGCTCTCTGACGGCGAGTGGTGCGACGGGAGTGACTCCGCCCAGGAGTTCCACAGTTCA
AAATTCCGACCGTACGAGGCTGCTTACGGCAGAGAGAGATCCCACGCGCCACAGAAGAAA
CATCACATGTTCGGGAAGCGATCCTTCCAGGAACAGCCGTCCCAAGAAACCAGACCGGTT
GTGAAATACGAATGCGAACAAACATACCATGAGATGCATATGCATGCAGATTACACCCCT
CGCCAGCACATACCGCCCCAGCTAGGTGTGCAGCCGACGTTGGACATCAATTCACCACAC
TCAAGCCACGCATTGCAACATACAACGCTGCCGAGCCCGAACCCGCCGCGATTCGGGTTC
AGTTCGGGAGATAGAGTGAGACACAACCACACATACAGCGCAGCCCTGCCGCCCACAGAG
GAGAGACTACCCACGAGAGATAAGAGAGGATTACATATCAGCACATATATATCTGTTTTT
TGTCAACGTGTGATCCGCCGTCTAACCGACGGCAGTACTTCCGACAGCGGCAGCGGACAT
CTCAGTAGAGACGAGAAGAGAGCGAAGGCTTTAGGTATACCGCTGGAGGTCCAGGACATC
ATCAACCTGCCCATGGACGAGTTCAACGAGCGGCTCTCCAAACACGACTTGAGCGAGGCG
CAGCTGTCGCTGATCCGAGACATACGGAGGCGGGGCAAGAACAAGGTGGCAGCACAGAAC
TGCCGGAAACGGAAGCTGGACCAGATCACCTCCCTGGCAGACGAGGTCCGCACGGTCCGC
GACAGGAAGGCCCGCACGCAGAGAGACAGACACAACTTGCTGGCCGACAGGCAGAAGCTC
AAGGAGAGGTTCGCCGCGCTCTACAGACACGTGTTCCAGCACCTCCGCGACCCTGAAGGA
CGACCCTTGTCCTCCAGCCAATACTCCCTACAACAAGCGGCTGACGGCAGCGTAGTTCTC
GTGCCCAGGATGGGAGGAGACCACTCCATGAACCGGACGGAGGAGGACCTCGAGCGGAAG
AACAACTACGAGCACTAG
Protein sequence:
MSSSAIYLVPLDIIAHGGAGYAPNYHAPIPPIPEKHHEAYGAPAPLDGAYKVEAAHHPQQ
HDGLYYQTPTEPQQDGFLQSILNDEDLQLMDMAMNEGMYTMRMLDGAPTVHQTHAHMPVA
AERDSASDSAVSSMGSERVPSLSDGEWCDGSDSAQEFHSSKFRPYEAAYGRERSHAPQKK
HHMFGKRSFQEQPSQETRPVVKYECEQTYHEMHMHADYTPRQHIPPQLGVQPTLDINSPH
SSHALQHTTLPSPNPPRFGFSSGDRVRHNHTYSAALPPTEERLPTRDKRGLHISTYISVF
CQRVIRRLTDGSTSDSGSGHLSRDEKRAKALGIPLEVQDIINLPMDEFNERLSKHDLSEA
QLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKARTQRDRHNLLADRQKL
KERFAALYRHVFQHLRDPEGRPLSSSQYSLQQAADGSVVLVPRMGGDHSMNRTEEDLERK
NNYEH