| New model in OGS2.0 | DPOGS201117 |
|---|---|
| Genomic Position | scaffold258:+ 44532-48685 |
| See gene structure | |
| CDS Length | 765 |
| Paired RNAseq reads | 41 |
| Single RNAseq reads | 204 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013666 (3e-56) |
| Best Drosophila hit | CG10664, isoform A (7e-39) |
| Best Human hit | cytochrome c oxidase subunit 4 isoform 1, mitochondrial precursor (5e-23) |
| Best NR hit (blastp) | AGAP008727-PA [Anopheles gambiae str. PEST] (7e-48) |
| Best NR hit (blastx) | cytochrome c oxidase polypeptide IV [Bombyx mori] (2e-46) |
| GeneOntology terms | GO:0005739 mitochondrion GO:0004129 cytochrome-c oxidase activity GO:0006123 mitochondrial electron transport, cytochrome c to oxygen GO:0005751 mitochondrial respiratory chain complex IV GO:0005811 lipid particle |
| InterPro families | IPR004203 Cytochrome c oxidase subunit IV IPR013288 Cytochrome c oxidase subunit IV, subgroup |
| Orthology group | MCL22661 |
Nucleotide sequence:
ATGAATCCCGTGTTAAAATTCCCCTACATATTTAAACCAAATGTCCAAAACATCAGAACG
ACTTACTGGTATTGTAGGACAGGTTACAGAGATGTAGTGGGCCACGGTGTTAATGGTATA
GCCGGCTACAAAGATGATTGCCATTTTCCATTCCCAGCTGTGAGGTTTAAGGAGAACACT
CAGGACATATGTGCCCTTCGCGAGAAGGAACGTTGTGATTGGCGGATGCTCTGCTGTGAG
GAGAAGAAGGCACTGTACCGCGCTTCCTTCTGCCAGACCTTCGCGGAGTTCCAGGCGCCA
ACTGGCCAATGGAAGTTCATCATGGGATGGGTGTTCGTCGTTACTTCCTTCACATTCTGG
GCAGCCATGTTTTATCATCATTACGTGTATGAGCCGTTGCCAAGTACATTCTCCAAGGAG
TCCCAGAAGGCTCAACTGCGCCGCATGCTGGAGCTACGTGTCAATCCCATAGACGGAATT
TCATCCCTCTGGGACTACGACAACGACAAATGGCTGGTAGCTATTGTCCTAGCCTTTATT
GGCATGTCCTTGGCCAATCCCGTCCCATCTGGTTTAGGGGGTCTGACCTACCCGCTGACA
TCTGTTCTCGTTGAGTCTAGATCCAGCTACATCAATCACGGAGTTTCTATTCCCGTTATC
AAAGTACCTATCGTGAACGTCCCTATACTACCTTCAATAGTAAAACCCGTCTACTCCATA
ATTAAACCTGTCGTCTTGAAAGATTACGGCTACGGTTTGCACTAA
Protein sequence:
MNPVLKFPYIFKPNVQNIRTTYWYCRTGYRDVVGHGVNGIAGYKDDCHFPFPAVRFKENT
QDICALREKERCDWRMLCCEEKKALYRASFCQTFAEFQAPTGQWKFIMGWVFVVTSFTFW
AAMFYHHYVYEPLPSTFSKESQKAQLRRMLELRVNPIDGISSLWDYDNDKWLVAIVLAFI
GMSLANPVPSGLGGLTYPLTSVLVESRSSYINHGVSIPVIKVPIVNVPILPSIVKPVYSI
IKPVVLKDYGYGLH