| New model in OGS2.0 | DPOGS201119 |
|---|---|
| Genomic Position | scaffold258:+ 60249-73242 |
| See gene structure | |
| CDS Length | 1431 |
| Paired RNAseq reads | 2453 |
| Single RNAseq reads | 6373 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013669 (0.0) |
| Best Drosophila hit | defense repressor 1 (1e-36) |
| Best Human hit | E3 ubiquitin-protein ligase MYLIP (5e-57) |
| Best NR hit (blastp) | PREDICTED: similar to myosin regulatory light chain interacting protein [Tribolium castaneum] (1e-104) |
| Best NR hit (blastx) | PREDICTED: similar to myosin regulatory light chain interacting protein [Tribolium castaneum] (8e-99) |
| GeneOntology terms | GO:0005515 protein binding GO:0005856 cytoskeleton GO:0005488 binding GO:0008270 zinc ion binding GO:0046872 metal ion binding GO:0007369 gastrulation GO:0005737 cytoplasm GO:0016874 ligase activity GO:0007275 multicellular organismal development |
| InterPro families | IPR019748 FERM central domain IPR000299 FERM domain IPR001841 Zinc finger, RING-type IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle IPR011993 Pleckstrin homology-type IPR013083 Zinc finger, RING/FYVE/PHD-type IPR018979 FERM, N-terminal IPR019749 Band 4.1 domain |
| Orthology group | MCL16504 |
Nucleotide sequence:
ATGTGGTTAGTCAGTCAGCCGAATTCAGTGATTCTGGAGATCAAGGTGGAACCCAATTCC
ATCGGACAACAGTGTTTGGAAAAAGTTTGCGAGAAGTTGGAGATAGGAGCAGAGGCCGAC
TACTTCGGACTCCGAGTGTGCTCGGGCTCCGGGCCCGGCAGGTGGCTGAACCTCAGGAAC
CACCTGGACCCGCACCGCATACCCAGCAGGCGCCTAGACCTGCGGGTCAAGTTCTGGGTC
CCGCCGCATCTCCTCATCAACGAGCCCACACGACACCAGTTCTACCTACACGCCAAGCTG
GACCTCATCGAGGGGCGGCTGGTGGTGGCCGACCAGGAGGTCGCCAGGAAGATAATAGCC
TACATCGCCCAGGCCGAGACCGGAGACTTCGACCCCCAGGCCGCCTCGAACGTGTACGCC
GACTGCGACAAGATAGGCCCCCAGGGAGAGAAGCCCGACGACCACGAGGCCAAGATCATG
GAGTATCACTGCCAGATAGCGGGCATGAGAGCCTCGCAGGCCGAATATAAACTGTTGAAG
GAGATATCTAAACTGGAGTCCTTCGGGGAGGAGATATTCTTCTGCAAGCCGGTGACGCAG
AACAACAACGCCCACAACCTGTACAGTCACCTGCTGTACCACAGGCAGCAGGCGGAGGAG
CCGCGGACCAGGGACGACCAGGAGATAGACGGGGGAGGAACCGTGGGCTGCCTCACCTCC
GCACACACCGGGGCGGGGTGCGGCTGTAGACTTAGCACCTGCGTGGGAGTCGGGCCTAGT
GGGATCGTGGTGTACAGGCCTGCCTGTAACGGAGTGCACGACATAGGAGTAGAGAAACAG
AGTATTCCCTACACATCCATCCACCGCGCCCAGCCTGTGCGCCGAATCTTCCAGCTGTGC
TACGTGTCTGATGAGGGTCACGAGGTCACCCTCCACGTGAAGATGGCCACCTCCAGCCAG
GCCGCTGCCCTGTACCGAGCAGTCACTGAGAAACATGCCTTCTACTACTGTGAAACTGTA
CGAACAGACGTCACGGAACAGTTCATTAGAGATCTGAAGGGGACGATCGCGTCCATCTTC
AACGACTCGTCGACCCTCGGGCGCCGCTACGTGTTCGACATCCGGCGCACGTGCCGCGAG
GTGCACGACCGAGCGCGCCGCGAGCACTACGCCCGGACCCGCGACAGGACCCAAACCGCT
CAGGAGTCCCGCCCTCGCTCCCGCTCCCGCTCGGTGGAGGCGCTGGCGTGCCGCGTGTGT
ATGGACGCGCCCATAGACACGCTGTTCCTGCCCTGCCGACACGTGCTCTGCTGCGAGCAC
TGCGCGCCGCGGTGTGAGCGCTGCCCGCTGTGTCGCGGGGAGGTGGACAGGCTGATGCAC
GTCTTCCTGCCGCTGGAGTACCAGCGGAGTCCCGGGGTTATTATAAAATAG
Protein sequence:
MWLVSQPNSVILEIKVEPNSIGQQCLEKVCEKLEIGAEADYFGLRVCSGSGPGRWLNLRN
HLDPHRIPSRRLDLRVKFWVPPHLLINEPTRHQFYLHAKLDLIEGRLVVADQEVARKIIA
YIAQAETGDFDPQAASNVYADCDKIGPQGEKPDDHEAKIMEYHCQIAGMRASQAEYKLLK
EISKLESFGEEIFFCKPVTQNNNAHNLYSHLLYHRQQAEEPRTRDDQEIDGGGTVGCLTS
AHTGAGCGCRLSTCVGVGPSGIVVYRPACNGVHDIGVEKQSIPYTSIHRAQPVRRIFQLC
YVSDEGHEVTLHVKMATSSQAAALYRAVTEKHAFYYCETVRTDVTEQFIRDLKGTIASIF
NDSSTLGRRYVFDIRRTCREVHDRARREHYARTRDRTQTAQESRPRSRSRSVEALACRVC
MDAPIDTLFLPCRHVLCCEHCAPRCERCPLCRGEVDRLMHVFLPLEYQRSPGVIIK