| New model in OGS2.0 | DPOGS204817 |
|---|---|
| Genomic Position | scaffold189:- 179507-190521 |
| See gene structure | |
| CDS Length | 1560 |
| Paired RNAseq reads | 1339 |
| Single RNAseq reads | 3981 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001417 (0.0) |
| Best Drosophila hit | ariadne, isoform B (1e-170) |
| Best Human hit | protein ariadne-1 homolog (1e-175) |
| Best NR hit (blastp) | PREDICTED: similar to ariadne ubiquitin-conjugating enzyme E2 binding protein [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC004596 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0006511 ubiquitin-dependent protein catabolic process GO:0005737 cytoplasm GO:0019787 small conjugating protein ligase activity GO:0005515 protein binding GO:0000151 ubiquitin ligase complex GO:0046872 metal ion binding GO:0008270 zinc ion binding |
| InterPro families | IPR002867 Zinc finger, C6HC-type |
| Orthology group | MCL11140 |
Nucleotide sequence:
ATGACCGGTCTGGAATGTGGTCACAGATTCTGTACACAGTGCTGGTGTGAATATTTAACT
ACTAAAATAATGGAAGAAGGCCTGGGTCAGACGATAGCGTGTGCGGCACACGCGTGCGAC
ATTCTCGTGGATGACGCGACTGTGATGCGTCTCGTCAGAGATCCGAGGGTCAAACTCAAG
TACCAGCACATCATCACCAACAGTTTCGTAGAGTGTAACCGCCTCCTCCGCTGGTGTCCA
TCCCCTGACTGCAGCAATGCCATCAAAGTGGCCTATGTTGAGGCAGCGGCAGTAACCTGC
CGATGTGGTCACACGTTCTGTTTCGCCTGCGGTGAGAACTGGCACGATCCCGTCAGGTGC
TGTCTGCTGAGGAAGTGGATAAAGAAATGCGACGACGATTCTGAAACATCGAACTGGATA
GCGGCCAATACTAAGGAGTGTCCCAAATGTAACGTGACCATAGAGAAGGACGGCGGCTGT
AACCACATGGTGTGTAAGAATCAGAACTGTAAGGCCGACTTCTGCTGGGTGTGCCTCGGA
CCCTGGGAGCCTCACGGCAGCAGCTGGTACAACTGCAACCGGTATGACGTGGACGAGGCC
AAAGCGGCCCGCGACTCCCAGGAGCGCTCGCGTGCAGCGCTGCAGCGCTATTTGTTCTAC
TGCAACCGCTATATGAACCACATGCAATCGCTGCGCTTCGAGTCCAAATTGTACGCATCC
GTGAAGGAAAAGATGGAAGAGATGCAACAGCATAACATGAGCTGGATTGAGGTGCAATTT
TTAAAGCGAGCTGTGGACATCCTCTGCCAGTGCCGTCAGACCCTCATGTACACTTATGTG
TTCGCGTACTACTTGAGGAAGAACAATCAGTCTGTCATCTTCGAGGATAACCAACGCGAC
CTGGAATCGGCCACCGAGACTCTATCGGAATACCTGGAAAGAGACATCACTAGCGAGAAT
TTGGCTGACATCAAGCAGAAAGTGCAGGATAAGTACAGATATTGTGACAGCCGGCGGAAG
GTACTACTGGAGCACGTCCACGAGGGTTACGAGAAGGATTGCTGGGACTACACAGACACT
ACATATCTGCCTTGGAGTTTTGAGTACGATCCGGTCAGTATCGTGCGAGGCTTGCGCGTC
CACATAGTGGGCGCTGTGTCGGCTGTACCCGTCCTCTGTTACACCGTTCAGTTTCCTATA
TACGTTGCGAACGGAGGACATACAGACATGCAGAAGCAGTGCCAGCCCGGTGGCAGTATA
AGATCAGGTTCAGATGGGGCGACGCACGCGTGGGAAGACGCGAGCGCCGCCGCAGCTAAT
GTAATTCAGGGGAAGAAAATTACATTAACTTTGAAAAGATATTGGAAATGTGATAAGTCG
AGTGCGGCGTCGCCAGTGGACGCGGCCGCGGGGACTGGCAGCGTCCACTTCGACGTCCGA
ATCAAGCGGACTTCATCAAGCAAACATCACTCCGCATCATTCTCCAACGCTCATGCATTT
TCTCTGATCGACATCATTTTGGGGAAGGGAAATGATATCGCCCAGTTTATATACACGTAG
Protein sequence:
MTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDATVMRLVRDPRVKLK
YQHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAAAVTCRCGHTFCFACGENWHDPVRC
CLLRKWIKKCDDDSETSNWIAANTKECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCLG
PWEPHGSSWYNCNRYDVDEAKAARDSQERSRAALQRYLFYCNRYMNHMQSLRFESKLYAS
VKEKMEEMQQHNMSWIEVQFLKRAVDILCQCRQTLMYTYVFAYYLRKNNQSVIFEDNQRD
LESATETLSEYLERDITSENLADIKQKVQDKYRYCDSRRKVLLEHVHEGYEKDCWDYTDT
TYLPWSFEYDPVSIVRGLRVHIVGAVSAVPVLCYTVQFPIYVANGGHTDMQKQCQPGGSI
RSGSDGATHAWEDASAAAANVIQGKKITLTLKRYWKCDKSSAASPVDAAAGTGSVHFDVR
IKRTSSSKHHSASFSNAHAFSLIDIILGKGNDIAQFIYT