| New model in OGS2.0 | DPOGS202534 |
|---|---|
| Genomic Position | scaffold189:+ 158205-179113 |
| See gene structure | |
| CDS Length | 6339 |
| Paired RNAseq reads | 2326 |
| Single RNAseq reads | 6056 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001557 (2e-10) |
| Best Drosophila hit | paralytic, isoform A (0.0) |
| Best Human hit | sodium channel protein type 2 subunit alpha isoform 2 (0.0) |
| Best NR hit (blastp) | voltage-gated sodium channel alpha subunit [Bombyx mori] (0.0) |
| Best NR hit (blastx) | voltage-gated sodium channel alpha subunit [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005248 voltage-gated sodium channel activity GO:0006814 sodium ion transport GO:0005887 integral to plasma membrane GO:0046684 response to pyrethroid GO:0046680 response to DDT GO:0045433 male courtship behavior, veined wing generated song production GO:0001518 voltage-gated sodium channel complex GO:0005886 plasma membrane GO:0055085 transmembrane transport |
| InterPro families | IPR001696 Voltage gated sodium channel, alpha subunit IPR018249 EF-HAND 2 IPR005821 Ion transport IPR010526 Sodium ion transport-associated |
| Orthology group | MCL10091 |
Nucleotide sequence:
ATGTCCGAGGACTTGGACTCGATCAGCGAGGAAGAACGAAGCTTGTTCCGACCTTTCACC
CGAGAATCATTGGCCGCTATCGAATCTCGCATAGCAGAAGAACATGCCAAGCAAAAGGAA
CTCGAGAAAAAACGAGCGGAAGGAGAGACCGATTTGGGGCGGACGAAAAAGAAAAAAGAA
GTGCGTTATGATGACGAAGACGAAGATGAGGGTCCCCAACCAGACGCGACCCTGGAACAG
GGCCTGCCACTGCCGGTCCGGATGCAAGGCTCCTTTCCGCTCGAACTGGCCTCCACCCCC
CTCGAGGACATCGATCCCTTCTACCACAACCAAACAACTTTCGTAGTCATAAGCAAGGGT
AAAGATATCTTCAGATTTTCGGCGACCAATGCCTTGTGGATATTGGATCCTTTCAATCCA
ATAAGAAGAGTGGCTATATACATTCTAGTACATCCTTTGTTCTCCCTATTTATTATAACC
ACGATTCTTGTGAACTGTATACTTATGATCATGCCTACCACGCCCACCGTTGAAAGTACT
GAAGTTATCTTTACCGGAATCTACACCTTTGAATCGGCGGTGAAAGTAATGGCCAGGGGT
TTCATACTACAGCCATTCACATACCTTAGAGATGCATGGAATTGGCTTGACTTCGTAGTT
ATAGCTTTAGCTTATGTGACGATGGGCATAGATCTCGGCAACTTGGCCGCTCTCAGAACA
TTCAGAGTTCTCCGAGCTTTGAAGACTGTGGCCATCGTACCGGGCTTGAAGACAATCGTT
GGTGCTGTAATAGAGTCGGTAAAAAATCTGCGGGATGTGATCATTTTGACCATGTTTTCT
CTATCTGTGTTTGCCTTAATGGGACTACAAATATATATGGGTGTGTTAACGCAGAAATGT
ATCAAGGTATTCCCCGAAGATGGCAGTTGGGGGAATCTAACCGACGAGAATTGGGAAAGG
TTTTGTCAAAATGAAACAAACTGGTATGGCGGAGATGGAGAATACCCTCTGTGTGGAAAT
TCATCAGGAGCGGGGCAATGCGAACCAGGCTACATGTGTTTGCAAGGTTACGGTCCGAAC
CCTAATTATGGCTACACAAGTTTCGATACCTTTGGCTGGGCTTTTCTATCGGCCTTCCGT
CTCATGACTCAGGATTATTGGGAGAATTTATATCAATTGGTGTTGAGATCGGCGGGCTCG
TGGCACGTTTTGTTCTTCGTTGTGATCATCTTCTTAGGGTCGTTCTACCTCGTGAATCTG
ATCTTGGCCATCGTCGCCATGTCGTACGACGAGTTGCAAAAGAAAGCTGAAGAAGAGGAA
CAGGCGGAAGAGGAAGCACTTAGGGAAGCCGAGCAAAAAGCGGCAGCACGAGCGGATAAG
CAGGAGGCACGAGAAGCACATGCTCGAGAGCAAGCGGCAGCAGCGGAAGCAGCAGCCTAC
GCAGAAGCACACCCCGCCAAGTCCCCCAGCGACTCCTCTTGTCAGAGCTACGAATTGTTC
GTGAACCAGGAGCGCGGCAACCAGGATGACAATACGCGCGAGCGCATGTCCCTCCGTAGC
GACCCCTTCCAAGATTCGGTGAGCACTCAGCCCACGCACAAGCCAACCGCCACCGAACAG
CACCACGAACCGGCACGCCGTCAGAGGAAGGTCAGCATGGTTCCCCACCCTGAACGCATT
AATAAATACGGACTGTTATCATATGGGCCACTGCGCGAAGGCTCGCAGGCTTCATTATCT
CTACCCGGATCACCGTTCAATTTGAGGAGAGGTTCGAGGGGTTCACATCAAATGGCTTTA
AGACCGAACGGAAGGAATCGCTATCCGCCCGGAGCTGATAGAAAACCATTGGTATTGTCA
ACATATTTGGATGCTCAAGAACATTTACCCTATGCAGACGATTCGAATGCTGTCACACCA
ATGTCAGAGGAAAATGGCGCAATCATAATACCAGTGTACTACGCCAATTTAGGCTCGAGG
CACTCTTCCTACACATCCCACCAGTCCCGATTATCGTACACATCTCACGGGGACCTGTTA
GGAGGCAAGGCGCAAACGAAGGAGGCCAGACTGAGAGGTCGATCGGCCTCCAGAAACCAC
AGTGTGACGTCACAACCGCACGCGTACCCTCTGCCACGCCAGGATTCATCACTGGCTTCT
AGGCCACTTAGAGAATATGAAATAAGTACTACGGAGTCCACGGATGAGGCTGGTAAGGTT
CTGAAACAGTCCAACGACAATCCATTCATAGAGTCCCAGAGACCAAACGTTGTGGATATG
AGAGACGTCATGGTTTTGAATGAGATAATAGAGCAAGCCGGAAGACAGAGTCGAGCGAGT
GAACAAAACGTGTCAGTGTACTACTTCCCAACAGCGGAAGACGATGAGGATGGACCAACC
TTCAAAGAGAGACTTCTGGAGTGCTTGATGAAGGGGATTGACTTCTTTTGTGTGTGGGAC
TGCTGTTGGTTGTGGTTGGAGTTCCAGAAATACGTGGCCCTGCTAGTGTTCGATCCTTTC
GTGGAACTGTTTATAACCTTGTGTATTGTGGTCAACACTCTGTTCATGGCTCTGGACCAT
CACGACATGGACAAAGATATGGACAAAGCATTAAAGAGTGGAAACTATTTCTTCACAGCG
ACATTCGGAATAGAAGCGATGCTAAAGTTAATAGCCATGAGTCCAAAGTACTATTTTCAA
GAAGGTTGGAACGTCTTCGATTTTATCATCGTCGCATTATCATTGCTAGAATTGGGTTTG
GAAGGTGTACAGGGTTTGTCCGTATTGCGTTCATTTCGTTTGCTTCGAGTATTCAAATTG
GCAAAGTCATGGCCGACACTTAATTTACTCATCTCTATAATGGGTAGGACGATGGGTGCC
TTGGGCAACCTGACCTTCGTATTGTGCATCATTATTTTCATATTTGCCGTGATGGGTATG
CAACTATTCGGGAAAAATTATGTGGACTATGTAGACCGGTTCCCTGATGGGGACCTTCCT
CGGTGGAACTTCACAGACTTCATGCACAGCTTTATGATAGTCTTCAGAGTGCTTTGTGGG
GAATGGATTGAGAGTATGTGGGATTGTATGCTTGTGGGTGACGTTTCCTGCATACCCTTC
TTCCTAGCGACCGTCGTCATTGGCAATCTTGTCGTACTAAACCTCTTCTTGGCCCTGTTA
CTGTCAAACTTCGGATCATCGAATTTATCATCGCCAACAGCAGATCAAGATACGAATAAA
ATAGCAGAAGCTTTTAACCGGATATCTAGGTTTATAGACTGGGTTAAAAAAAGCGTTGCT
GACATCTTGAAACTGGTGAAAAACAAGCTCACGAATCAGATTGCAATCCACGCTCCCGAA
CGCGTTGACAACGAACTGGAACTGGGTGCAGATATAGATGACGGAGTCCTCTACAAAGAT
AAGAAACTTAAAGACCAAGTGGAAGTTGCTATAGGTGATGGGATGGAATTTACAATACCC
GGTGATAACAAATACAAAAAAGGTAAATTATTAATGAACAATATCAATGCTATAACGGAC
AACCATACGGATAACAGGATAAACTGTGAGCTAAATCATCACGGATATCCAATCCAGGAC
GATGATACCATTAGTCAAAAATCATATGGTAGTCATAAAATTAGGTCATTTAAAGACGAG
AGCCATAAAGGATCGACTGACACCATAGACGGAGAAGAAAAGAAAGATGCTAGTAAAGAA
GAATTAGGTTTAGAAGAAGAAATGATAGCAGAAGAGGAAGATGGTAAATTAGATCTAGCC
AAAATAGACATCAAAGCCGGTGAAGGTGAGGTCATGGACTCGCCGGCCGACTGCTGTCCG
GAGCCTTGCTATCAAAGGTTTCCATTTTTGGCTGGAGATGACGAATCACCGTTCTGGCAG
GGCTGGGCTATGTTAAGACTCAAAACTTACAGACTTATTGAAAACACGTACTTCGAAACA
GCTGTGATAACTATGATATTACTCAGTAGTTTGGCTTTGGCTTTAGAAGATGTTCATTTA
CCACATCGACCTATACTCCAAGACATATTATATTATATGGATCGAATCTTTACTGTAATA
TTCTTTATCGAGATGTTGATCAAGTGGCTCGCTCTAGGATTTCAGAAATACTTCACGAAT
GCTTGGTGCTGGCTCGACTTCATCATTGTCATGGTCTCGCTTATAAACTTCGTAGCGGCG
CTTTGTGGCGCCGGTGGCATTCAGGCGTTCAAAACGATGCGAACGCTTCGAGCTCTCCGA
CCGCTCAGAGCTATGAGCCGCATGCAGGGCATGAGGGTGGTAGTGAACGCTCTGGTGCAA
GCGATACCATCCATCTTCAATGTGCTGCTCGTGTGTCTAATATTCTGGCTTATTTTCGCT
ATAATGGGTGTACAACTCTTCGCCGGGAAATATTTTAAGTGTGTCGACATGAACCATACC
ACCTTAAGCCACGAAATAATACCAGACAGAAACGCGTGCATTTTAGAAAATTATACCTGG
GAGAACTCACCAATGAATTTCGATCATGTTGGTAAAGCATATTTGTGCCTATTTCAAGTC
GCCACTTTCAAAGGTTGGATTCAGATTATGAACGACGCTATTGATTCACGAGAGGTAGAC
CGACAACCCATCAGAGAGACGAACATATACATGTATTTATATTTTGTATTTTTCATCATC
TTCGGATCTTTCTTCACTCTTAACCTATTCATTGGTGTGATCATCGATAACTTTAACGAG
CAGAAGAAGAAAGCTGGAGGCAGTCTTGAAATGTTCATGACAGAGGATCAGAAGAAGTAT
TACAACGCCATGAAGAAAATGGGTTCCAAGAAACCACTGAAGGCCATACCAAGACCAAGA
TGGCGACCTCAAGCAATTGTATTCGAAATAGTAACGGATAAGAAATTCGACATGATTATC
ATGTTGTTCATTGGTCTGAACATGTTGACAATGACACTAGACCACTATCAGCAGTCAGAC
ACGTTCAGCGCTGTCCTGGATTACCTTAACATGATATTCATAGTAATATTTAGTTCAGAG
TGCCTGTTAAAAATTTTCGCCTTACGATACCATTACTTCGTGGAGCCTTGGAATTTATTC
GATTTCGTCGTTGTGATGTTTTCTATACTCAGTTTGGTATTGAGTGATATTATAGAGAAG
TACTTTGTGTCGCCTACTCTGTTAAGAGTAGTCAGAGTAGCAAAAGTTGGTCGAGTTCTT
CGACTTGTGAAAGGAGCAAAGGGCATCCGAACGCTATTGTTCGCCTTAGCCATGTCACTG
CCAGCTCTCTTCAATATTTGTTTACTATTGTTTCTAGTGATGTTTATCTTCGCAATATTT
GGAATGTCATTTTTCATGCATGTGAAGGACAAAGGAGGCCTCGACGACGTGTACAATTTT
AAAACTTTTGTGCAGAATATGTTTCATATGTCAACCTCAGCCGGTTGGGACGGAGTTCTC
GACGGCATCATAAATGAGGAAGAGTGTGATCTGCCAGATAATGAGCGTGGTTACCCTGGA
AACTGTGGATCGGCTACAATCGGGATCACTTACCTACTGTCCTACCTCGTAATATCTTTC
CTCATTGTTATTAACATGTATATCGCTGTCATTCTCGAGAACTACTCTCAGGCAACGGAA
GATGTACAAGAAGGCCTAACTGACGACGACTACGACATGTACTACGAAATATGGCAGCGA
TTCGATCCCGAGGGTACGCAATATATCAGATACGACCAACTGTCTGATTTCTTAGATGTG
CTCGAACCGCCGTTGCAAATACACAAACCTAATAAGTACAAGATTATATCTATGGACATA
CCAATATGCCGCGGAGACATGATGTTCTGCGTGGACATCCTTGACGCACTCACGAAGGAT
TTCTTCGCGAGGAAGGGCAATCCCATCGAGGAGTCGGTGGAGGTTGGCCGGCCAGACGAG
GTCGGGTACGAGCCCGTGTCGTCGACGTTGTGGCGACAGCGCGAGGAGTACTGTGCGCGG
CTCATCCAGCATGCCTGGCGGCGGCATCGACGAGCGCAGTCCCCGACGGGCGCCTCGGTG
ACTGGATCGTGCGCTGGCGAGGCGGAAGGCGCGCCCACGGCCGTGCTACTGGACGCAGGC
GGTGGTGCGGGCGGTGCGCATCGCGTGGTGCTGCAGGCAGCTGGTGCGGCGCCCCGGCCT
CCTGAACCCGCGCCGCCGCCCGACGCCGCCCGCGCCCGTCTGACCCGCGCTGGCGCTCGC
GCTGCTGCCCGCGCTGGTCGACGACGCGCCGCTGCCCCTGCCCGCACCGCTGCCCGAGCT
CTTGAGCCCGCCCAAGCGCACTTGATTTTTTTACGCTGA
Protein sequence:
MSEDLDSISEEERSLFRPFTRESLAAIESRIAEEHAKQKELEKKRAEGETDLGRTKKKKE
VRYDDEDEDEGPQPDATLEQGLPLPVRMQGSFPLELASTPLEDIDPFYHNQTTFVVISKG
KDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVEST
EVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRT
FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKC
IKVFPEDGSWGNLTDENWERFCQNETNWYGGDGEYPLCGNSSGAGQCEPGYMCLQGYGPN
PNYGYTSFDTFGWAFLSAFRLMTQDYWENLYQLVLRSAGSWHVLFFVVIIFLGSFYLVNL
ILAIVAMSYDELQKKAEEEEQAEEEALREAEQKAAARADKQEAREAHAREQAAAAEAAAY
AEAHPAKSPSDSSCQSYELFVNQERGNQDDNTRERMSLRSDPFQDSVSTQPTHKPTATEQ
HHEPARRQRKVSMVPHPERINKYGLLSYGPLREGSQASLSLPGSPFNLRRGSRGSHQMAL
RPNGRNRYPPGADRKPLVLSTYLDAQEHLPYADDSNAVTPMSEENGAIIIPVYYANLGSR
HSSYTSHQSRLSYTSHGDLLGGKAQTKEARLRGRSASRNHSVTSQPHAYPLPRQDSSLAS
RPLREYEISTTESTDEAGKVLKQSNDNPFIESQRPNVVDMRDVMVLNEIIEQAGRQSRAS
EQNVSVYYFPTAEDDEDGPTFKERLLECLMKGIDFFCVWDCCWLWLEFQKYVALLVFDPF
VELFITLCIVVNTLFMALDHHDMDKDMDKALKSGNYFFTATFGIEAMLKLIAMSPKYYFQ
EGWNVFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGA
LGNLTFVLCIIIFIFAVMGMQLFGKNYVDYVDRFPDGDLPRWNFTDFMHSFMIVFRVLCG
EWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSNLSSPTADQDTNK
IAEAFNRISRFIDWVKKSVADILKLVKNKLTNQIAIHAPERVDNELELGADIDDGVLYKD
KKLKDQVEVAIGDGMEFTIPGDNKYKKGKLLMNNINAITDNHTDNRINCELNHHGYPIQD
DDTISQKSYGSHKIRSFKDESHKGSTDTIDGEEKKDASKEELGLEEEMIAEEEDGKLDLA
KIDIKAGEGEVMDSPADCCPEPCYQRFPFLAGDDESPFWQGWAMLRLKTYRLIENTYFET
AVITMILLSSLALALEDVHLPHRPILQDILYYMDRIFTVIFFIEMLIKWLALGFQKYFTN
AWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQ
AIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDMNHTTLSHEIIPDRNACILENYTW
ENSPMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSREVDRQPIRETNIYMYLYFVFFII
FGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPR
WRPQAIVFEIVTDKKFDMIIMLFIGLNMLTMTLDHYQQSDTFSAVLDYLNMIFIVIFSSE
CLLKIFALRYHYFVEPWNLFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVL
RLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKGGLDDVYNF
KTFVQNMFHMSTSAGWDGVLDGIINEEECDLPDNERGYPGNCGSATIGITYLLSYLVISF
LIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQRFDPEGTQYIRYDQLSDFLDV
LEPPLQIHKPNKYKIISMDIPICRGDMMFCVDILDALTKDFFARKGNPIEESVEVGRPDE
VGYEPVSSTLWRQREEYCARLIQHAWRRHRRAQSPTGASVTGSCAGEAEGAPTAVLLDAG
GGAGGAHRVVLQAAGAAPRPPEPAPPPDAARARLTRAGARAAARAGRRRAAAPARTAARA
LEPAQAHLIFLR