New model in OGS2.0 | DPOGS216089  |
---|---|
Genomic Position | scaffold375:+ 73136-74854 |
See gene structure | |
CDS Length | 1650 |
Paired RNAseq reads   | 126 |
Single RNAseq reads   | 367 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007797 (0.0) |
Best Drosophila hit   | CG11966 (2e-17) |
Best Human hit | sal-like protein 1 isoform b (4e-12) |
Best NR hit (blastp)   | PREDICTED: similar to CG4374 CG4374-PA [Tribolium castaneum] (5e-103) |
Best NR hit (blastx)   | PREDICTED: similar to CG4374 CG4374-PA [Tribolium castaneum] (9e-102) |
GeneOntology terms    | GO:0003676 nucleic acid binding GO:0005622 intracellular GO:0008270 zinc ion binding |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like |
Orthology group | MCL16376 |
Nucleotide sequence:
ATGACGGCCACTGCTCCTGAACTCTCAAAATCGGATTTTTTTGATTTTGTGACATCTAAT
GAAGTGACGGACGCTCAATATAAACAGCAAATGCGATCAGTCAACGTGTTCATGGAATCA
CCTGATTCAAGATCCAACCCTTTGTTGTCAGAGGAGCCCAAGGAGCAAAACAACAACAAC
ATACTTGCCGTCAGCGGTGGTCAGTCGACCAGCGCAGGTATGACGACCGCCACCAGTTCG
AATCCACTTCAGAGTTTCGACTCTATTTGGAACGTAGATCGGGATCGCGACCGCATCGAG
ACAGCAATGTTGGAGGATCTCAACAAATACTATTGGAATCAAGAAAACGATATTAACGGA
ACCCATCCATGTTCTGATACAGCAATATCAAATAAATTAATAAGCAATAATACGGATGGA
CAAATATACACACTGACAGTTTTAAATCAAGACATTAATGAAACAAACACTAACCGCTAT
TGGGTAAAAGAGGAAGATGTTTCAATGTCAAGTCCGATAGACGTTGAACAAAATCCCTCC
TTAGACCTGGAATCTATACTTAACATGAATGGATTTCCAAATGATTTCAGTCAAGATACA
CTTAAATTAAGTTCAAACAACTTGGTCAAAATTGAACCATTCAATTATGATGACAGTGAA
TTTCAAAGTAGTGACAAAAAAGATGATTCCATAATAAGCAACCCCACATTATTAGAAGTG
GAATATAATAACAATAACAACGACTGGAAATTGACTGACCAAAACACAGAATCAAACGAA
TCATTACTACGGAGTGCCTTACAAGGAAAAGCTTTTATTAGATATAGTACAATTCAAAAA
AATACTGTCAATAAATTTGACGCAGAATCAGAGTTAAAGAGGGCTATTATTAATAATAAC
AATAAACCAGATGTACCATCTATGTATCAAGATAACAAAGATACCGATTCTAGCCTTTTG
ATGGCCATAGCACCACCAAACGGTAATGTAAATATATCAATATTATTAGAAGAACCTTCA
GCGACTGTCTTATCGAATGGAGATAATCCTACATCAACACAAAGCATGGACGACATTTTA
CTTTCCCAACTTGATGCTAGTTATCCCGACGACTATGAAAAATTGAAGCGGATAGCTACT
GAACTAGGTGAATCAGTGCAACCATTTTGTACTGTAGAGCCTATTGATTCCGTTCGTAAT
GTATACAATATTCATCATGTAAATGGCGAATTAGTAACTATGATTCCAGCAGGAGAAGTT
CAGTTGCCTCAACACTTACAGATAGTAACGGCATCACCCACGGTGACGAGTACTAAGCCG
GGAGGTAAGAAGATCAGAAGAATCCAAAATAAAAATTCACCCCCAACAACACAAACACAG
TCGGGGACGGCTGTTCAAGCGGCGACATCTACTTCAAATGGTGTCCGAAAAGAACGGTCG
CTACACTACTGCTCTATTTGTTCTAAAGGTTTTAAGGACAAATACTCTGTTAATGTGCAT
GTGAGAACTCACACCGGAGAGAAACCCTTTACATGTTCTTTATGCGGGAAAAGCTTTCGA
CAGAAGGCGCATCTCGCAAAACATTACCAGACACACATCGCACAAAAGAGCGCAGCTGCT
AACGGTGGCTCTAAACCTTCGAAGAGGTAA
Protein sequence:
MTATAPELSKSDFFDFVTSNEVTDAQYKQQMRSVNVFMESPDSRSNPLLSEEPKEQNNNN
ILAVSGGQSTSAGMTTATSSNPLQSFDSIWNVDRDRDRIETAMLEDLNKYYWNQENDING
THPCSDTAISNKLISNNTDGQIYTLTVLNQDINETNTNRYWVKEEDVSMSSPIDVEQNPS
LDLESILNMNGFPNDFSQDTLKLSSNNLVKIEPFNYDDSEFQSSDKKDDSIISNPTLLEV
EYNNNNNDWKLTDQNTESNESLLRSALQGKAFIRYSTIQKNTVNKFDAESELKRAIINNN
NKPDVPSMYQDNKDTDSSLLMAIAPPNGNVNISILLEEPSATVLSNGDNPTSTQSMDDIL
LSQLDASYPDDYEKLKRIATELGESVQPFCTVEPIDSVRNVYNIHHVNGELVTMIPAGEV
QLPQHLQIVTASPTVTSTKPGGKKIRRIQNKNSPPTTQTQSGTAVQAATSTSNGVRKERS
LHYCSICSKGFKDKYSVNVHVRTHTGEKPFTCSLCGKSFRQKAHLAKHYQTHIAQKSAAA
NGGSKPSKR