| New model in OGS2.0 | DPOGS207813 |
|---|---|
| Genomic Position | scaffold3481:- 5840-11204 |
| See gene structure | |
| CDS Length | 1122 |
| Paired RNAseq reads | 4135 |
| Single RNAseq reads | 11854 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005503 (5e-175) |
| Best Drosophila hit | Lissencephaly-1, isoform F (2e-159) |
| Best Human hit | platelet-activating factor acetylhydrolase IB subunit alpha (2e-150) |
| Best NR hit (blastp) | platelet-activating factor acetylhydrolase 1b alpha subunit [Culex quinquefasciatus] (5e-180) |
| Best NR hit (blastx) | platelet-activating factor acetylhydrolase 1b alpha subunit [Culex quinquefasciatus] (9e-172) |
| GeneOntology terms | GO:0048477 oogenesis GO:0030706 germarium-derived oocyte differentiation GO:0048135 female germ-line cyst formation GO:0045478 fusome organization GO:0050790 regulation of catalytic activity GO:0030234 enzyme regulator activity GO:0007303 cytoplasmic transport, nurse cell to oocyte GO:0051647 nucleus localization GO:0008104 protein localization GO:0030716 oocyte fate determination GO:0005938 cell cortex GO:0007294 germarium-derived oocyte fate determination GO:0045502 dynein binding GO:0030381 chorion-containing eggshell pattern formation GO:0030473 nuclear migration along microtubule GO:0007312 oocyte nucleus migration involved in oocyte dorsal/ventral axis specification GO:0008298 intracellular mRNA localization GO:0030424 axon GO:0043025 neuronal cell body GO:0048813 dendrite morphogenesis GO:0030425 dendrite GO:0007405 neuroblast proliferation GO:0008088 axon cargo transport GO:0016319 mushroom body development GO:0030286 dynein complex GO:0007018 microtubule-based movement GO:0042623 ATPase activity, coupled GO:0005869 dynactin complex GO:0051225 spindle assembly GO:0000776 kinetochore GO:0006886 intracellular protein transport GO:0051299 centrosome separation GO:0007093 mitotic cell cycle checkpoint GO:0051383 kinetochore organization GO:0005828 kinetochore microtubule GO:0031616 spindle pole centrosome GO:0048814 regulation of dendrite morphogenesis |
| InterPro families | IPR019775 WD40 repeat, conserved site IPR011046 WD40 repeat-like-containing domain IPR020472 G-protein beta WD-40 repeat IPR017252 Dynein regulator IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR019781 WD40 repeat, subgroup IPR001680 WD40 repeat |
| Orthology group | MCL14906 |
Nucleotide sequence:
ATGACCGGGGAGATGGATCGCAAGTTCGGTGGTCTGCTGGAGAAGAAGTGGACATCCGTT
ATAAGGCTACAGAAGAAGGTGATGGAACTGGAGTCGAAGCTGTCCGAGGCTCAGAAGGAG
TATATAGAGGGTGCTCCGACACGGGCCAAGCGCACGCCCACAGAGTGGATACCACGACCG
CCTGAGAAGTTCTCACTGACGGGACATCGGGCAACTATTACTAAGGTGATATTCCACCCG
TTGTTCAGCTTGTTCGTGTCGTCCAGCGAGGACGCCACGATCAAAGTGTGGGACTTCGAG
AACGGTGACTACGAACGAACCCTCAAGGGTCATACGGACTCCGTACAGGACATCGCGTTC
GACCAGCACGGGAAAGTGCTGGCATCCTGCAGCGCGGACATGTCTATAAAGCTGTGGGAC
TTCAACCAGAGCCACGAGTGCATAAAGACCATGCACGGCCACGACCACAACGTGTCCTCG
GTGGCCTTCTCGCCGGGGGGAGACATCGTGTACTCCGCCAGCAGGGACAAGACCATCAAG
GCCTGGGAGGTCGCCACTGGTTACTGCGTGAAGACTTACAAGGGTCACCGCGAGTGGGTG
AGGATGGTGCGAGTGTCTGCTGACGGGAAGCTGCTCGCTTCCTGTTCCAACGATCAGACC
GTACGCATATGGAACGCCGAGACTAACGAATGCAAGATGGAGCTACGCGAGCACGAGCAC
GTGGTGGAGTGCGTGTCGTGGGCGCCCGAGGCAGCAGCCGCCGCTATCAACGAGGCGGCC
GGCGGAGACAACCGCCGCGCCGCCTACCACGGACCCTTCCTCGCGAGCGGCTCCAGGGAT
AAATCCGTCAAGATCTGGGACGTGACGACGGGGCAATGCCTGGCGACGCTGGTGGGTCAC
GACAACTGGGTGAGAGGCGCCGCGTGGCATCCCGGCGGACGGTACTTACTGACGGCCTCC
GACGACAAGACGCTGCGTGTCTGGGACGTCGCTCACACGCGCTGTCTCAAGACACTGTAC
GCTCACCAACACTTCGCTACCAGCCTCGATTTCCACAAGAACTTGCCATATGTGATATCC
GGCAGCGTCGATCAGACCGTCAAAGTTTGGGAGTGTCGCTAG
Protein sequence:
MTGEMDRKFGGLLEKKWTSVIRLQKKVMELESKLSEAQKEYIEGAPTRAKRTPTEWIPRP
PEKFSLTGHRATITKVIFHPLFSLFVSSSEDATIKVWDFENGDYERTLKGHTDSVQDIAF
DQHGKVLASCSADMSIKLWDFNQSHECIKTMHGHDHNVSSVAFSPGGDIVYSASRDKTIK
AWEVATGYCVKTYKGHREWVRMVRVSADGKLLASCSNDQTVRIWNAETNECKMELREHEH
VVECVSWAPEAAAAAINEAAGGDNRRAAYHGPFLASGSRDKSVKIWDVTTGQCLATLVGH
DNWVRGAAWHPGGRYLLTASDDKTLRVWDVAHTRCLKTLYAHQHFATSLDFHKNLPYVIS
GSVDQTVKVWECR