| New model in OGS2.0 | DPOGS203240 |
|---|---|
| Genomic Position | scaffold142:- 43036-46075 |
| See gene structure | |
| CDS Length | 918 |
| Paired RNAseq reads | 181 |
| Single RNAseq reads | 502 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007075 (2e-107) |
| Best Drosophila hit | stem cell tumor, isoform A (4e-71) |
| Best Human hit | rhomboid-related protein 3 (2e-37) |
| Best NR hit (blastp) | AGAP005058-PA [Anopheles gambiae str. PEST] (2e-114) |
| Best NR hit (blastx) | AGAP005058-PA [Anopheles gambiae str. PEST] (8e-74) |
| GeneOntology terms | GO:0007173 epidermal growth factor receptor signaling pathway GO:0005886 plasma membrane GO:0008236 serine-type peptidase activity GO:0016021 integral to membrane GO:0004252 serine-type endopeptidase activity GO:0005509 calcium ion binding |
| InterPro families | IPR017213 Peptidase S54, rhomboid, metazoan IPR002610 Peptidase S54, rhomboid IPR022764 Peptidase S54, rhomboid domain |
| Orthology group | MCL11025 |
Nucleotide sequence:
ATGAGCGGCAAGCGCACGCGCAGCTATAGATGTGCGGTGCATCAAAGAGACAGAGAAGTC
AGCTCTGAGAACGACTTTCATTTACTATTAGAAGATCCAACACTTTTTGCCAGGATGGTT
CATCTCGTGGCTATGGAAGTGCTCCCGGAGGAGAGGGATCGGAAATACTATCAGGAAAGA
TACACGTGCTGTCCCCCGCCGCTCTTCATCATCTGCGTCACTTTACTAGAATTGGGAGTG
TTCGCGTGGTACGCGTGGGGCGGCGTGGCGGCCGCGGGCCCGGTGCCTGTGGACTCGCCC
CTCGTGTATCGACCTGACAGGAGACAGGAGTTGTGGCGCTTCCTCACATACAGCGTGGTA
CACGCCGGCTGGCTGCACCTCGCATTCAACTTGCTTGTACAGTTAGCGGTGGGTCTGCCG
TTGGAGATGGTTCACGGTGCGGTGAGGTGTGGCGCGGTGTACTTGGCGGGTGTGCTGGGC
GGGTCGCTGGCCGCCTCCGTCCTCGACCCTGATGTGTGTCTCGCGGGAGCCTCGGGTGGA
GTGTACGCCTTACTAGCGGCTCACCTCGCTAATGCCTTGTTGAACTTCCACGCAATGAGA
TACGGCGCTGTGAGACTCGTGGCAGCCCTCGCCGTCGCATCCTGTGACGTCGGTTTCGCT
GTCCACGCTAGGTATACTAAGGAGGCGCCGCCTGTATCGTACGCGGCGCACGTGGCGGGC
GCTCTGGCCGGTCTCACCATCGGACTGTTGGTGTTGAAACACGCACAACAGCGCTTATGG
GAGAGACTGTTGTGGTGGGCGGCGCTAGGAGCGTACGCGGCCTGCACTCTATTCGCCGTA
TTATACAACGTGTTCAGCGGACCGGTCGATGAATTGCACTATATGCCGCCCGATCCGCCG
CCAGACGTCGGCTTTTGA
Protein sequence:
MSGKRTRSYRCAVHQRDREVSSENDFHLLLEDPTLFARMVHLVAMEVLPEERDRKYYQER
YTCCPPPLFIICVTLLELGVFAWYAWGGVAAAGPVPVDSPLVYRPDRRQELWRFLTYSVV
HAGWLHLAFNLLVQLAVGLPLEMVHGAVRCGAVYLAGVLGGSLAASVLDPDVCLAGASGG
VYALLAAHLANALLNFHAMRYGAVRLVAALAVASCDVGFAVHARYTKEAPPVSYAAHVAG
ALAGLTIGLLVLKHAQQRLWERLLWWAALGAYAACTLFAVLYNVFSGPVDELHYMPPDPP
PDVGF