| New model in OGS2.0 | DPOGS203243 |
|---|---|
| Genomic Position | scaffold142:- 5610-7112 |
| See gene structure | |
| CDS Length | 1503 |
| Paired RNAseq reads | 843 |
| Single RNAseq reads | 2213 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007077 (4e-134) |
| Best Drosophila hit | ND |
| Best Human hit | zinc finger CCCH domain-containing protein 10 (3e-12) |
| Best NR hit (blastp) | PREDICTED: similar to zinc finger CCCH-type containing 10 [Acyrthosiphon pisum] (8e-28) |
| Best NR hit (blastx) | PREDICTED: similar to zinc finger CCCH-type containing 10 [Acyrthosiphon pisum] (1e-26) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0008270 zinc ion binding GO:0046872 metal ion binding |
| InterPro families | IPR000571 Zinc finger, CCCH-type |
| Orthology group | MCL18061 |
Nucleotide sequence:
ATGAGTTCTGAAGAAAATGATAACATACCAGCTGCAAGTAATTACTGCAGAGACTTTATA
AGAGGATGTTGTTCTAGAGATAATTGCAGGTTTCTTCATGAAATTCCACCGAAAGCCCGT
TTGAAAGAGCTGTTTCGTTTTTGTCATGATTACCAAAATATAGGTTGCTATAGATTGAAT
TGTAAATTTCTACACATTTCTTTAAAGAATGAGGAACAATTTTACGCTACTGGTGTTTTT
CCTCGTGATGTTCGTAATGTACCAATTACTTGTCAATCCGCTATCCAAGGAGCCTGTTCC
AATCAAGACTGCAAGTTTAAACATGTAAGAGATGCACCTTTCAGTGAGATAGGCGCAAAG
CGTAATGCACAACAGCCAATGTTTAATCATACATTCTCCCCACATATAAGGGATAATGAT
TCCCCACCAGAGGCTAAGTTTAGAAGATATATGGAAGAACCAAATTTGGACAACCAGACT
ATGCAGCCACCAACTATGTGTCAGAATTGTGATGCATTAAATCATAGAATAAAGTTACTT
CATGATAATATTAGTGTTTTGCTCAAGAAGGTAGCTGATTTGACAGAGAAAAATGTTCAG
CTGACATCAATGAATGAGTTTTTATTAGAACAGACAGCATCTGTTAGAAGTGATCAGCCA
TGTGTTATAACATCAAGACATGGTACTTCAGCACCAGTTTCTTTGGCAACTGTAAGTGTG
ACACCAGTTGTGAGTCTGGCTGGAGCCATTCCAGCACTCATGCCTACAGCAGCCACACCA
AACTTGACATTGGCACCGGCCGCTTCCCAAGCCCAGCTCCTCACTCCTGCTCCTCAAATA
CTTACTGTTAGCACAACACAACAGTTAGTTGGTAATTCTGGAGCTTTAATAGTAACAAGT
GCAGGAGCTCAACAGCTAATGCAAGTCAGTGATTCTGGCACACTTATGGGAGGGGGTCAA
ACTGTTGTTGCTGTTACTCCAGCCCAGTTGACTTTAGCACCACCTACACAACAGTTAATG
AGCAATGCGCCACAGACAGCAGTACAACAGCTGGTTCAAACATCTGCTCTACAACCACAA
CTGGGACCGCAACATCAGGCATCGCAATATGCTGCACAGCAATCAGTACAGCATCTAGCT
CAGCATTCAGCTCAGCATTTGGCTGCACAGCAATCTGCTCAGCACCTTGCTGCTCAACAA
TCTGCCCAACATTTAGCTCAGTCAGCCCAGCATTTGGCTGTCGCTCAACAGTCAGCCCAG
CAATTAGCTGCGCAGCAATCAGCACAACAAATGGTGGCTCAACAATCTGCCCAACAAGCT
GCTATGGTGGCTCAGCAGCAGTCAGCACAGCAACAGCTGGTGCCATCAGCCCAACAACTG
GTTCATCAGACTTCGACTCAGCAAATAACGATTTCTAGCACTAGTCAGCCATTGGCTTTA
CCAAATTCTCAAGCTCAGCCACTGACATTCCCTATAATCTCTCAGAGCATCCTGCCCCAT
TAG
Protein sequence:
MSSEENDNIPAASNYCRDFIRGCCSRDNCRFLHEIPPKARLKELFRFCHDYQNIGCYRLN
CKFLHISLKNEEQFYATGVFPRDVRNVPITCQSAIQGACSNQDCKFKHVRDAPFSEIGAK
RNAQQPMFNHTFSPHIRDNDSPPEAKFRRYMEEPNLDNQTMQPPTMCQNCDALNHRIKLL
HDNISVLLKKVADLTEKNVQLTSMNEFLLEQTASVRSDQPCVITSRHGTSAPVSLATVSV
TPVVSLAGAIPALMPTAATPNLTLAPAASQAQLLTPAPQILTVSTTQQLVGNSGALIVTS
AGAQQLMQVSDSGTLMGGGQTVVAVTPAQLTLAPPTQQLMSNAPQTAVQQLVQTSALQPQ
LGPQHQASQYAAQQSVQHLAQHSAQHLAAQQSAQHLAAQQSAQHLAQSAQHLAVAQQSAQ
QLAAQQSAQQMVAQQSAQQAAMVAQQQSAQQQLVPSAQQLVHQTSTQQITISSTSQPLAL
PNSQAQPLTFPIISQSILPH