New model in OGS2.0 | DPOGS203244  |
---|---|
Genomic Position | scaffold142:+ 1041-3817 |
See gene structure | |
CDS Length | 1110 |
Paired RNAseq reads   | 149 |
Single RNAseq reads   | 462 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010714 (6e-33) |
Best Drosophila hit   | CG11902 (2e-25) |
Best Human hit | zinc finger protein 226 isoform a (8e-23) |
Best NR hit (blastp)   | PREDICTED: similar to zinc finger protein 617 [Tribolium castaneum] (1e-27) |
Best NR hit (blastx)   | PREDICTED: similar to zinc finger protein 617 [Tribolium castaneum] (2e-31) |
GeneOntology terms    | GO:0008270 zinc ion binding GO:0003676 nucleic acid binding GO:0005634 nucleus |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like |
Orthology group | MCL21813 |
Nucleotide sequence:
ATGACTTCTCTAGTTTTACTTAAATCAATTTTATTGGCGAGTGTTTTGCAAAAAAACAAA
AAGAAAAAAAAAATTAAATCAAAGAAATTGTTTTCTACAAACAAAATAGATTTAAAGATA
TGTCGTATATGCAATGAAGAAAAAGGAGAAATACCGATATTTAATGATTGTATACAGCCT
AACATACCAGAAGAAATAAAACATTTTTCAGGAGTTTCAATATTTAAAACCGATAATTTA
CCAAAGCAAATATGTCAAAACTGTTTGGATTTACTAAATGGCTGTATAATGTTTCGAGAA
ATGTGCCAAAAGACGAACCAGCTTATGAAAAGAATTTCCTCGGTCCCAGAAATTGCACCT
TGTATCAGAAAGGAGGAGGATGTGAAGAAAGATTTTACAATTGACCAAAATGGAAGTGAT
GAATCATTGAACATACCTTCACCGACATGTTCAGAAGACAATTCAGAAATATGGAACTGT
ACTTCTTGTAAAACAGAATATTACAATCTGGAATCATACAACAAACATTTAGTTGAATGT
AAAACACAAATCAACGATTTGAAACCTGAATTAGATCGGAAAAGAACAAAAGAGACATTC
CTCTGTGATATTTGTGGAAAAGTTGCCCGTTCCAATGCAAATCTTCTCATTCATATGGCC
ATACATGAGAATATATTTCCTTTCAAATGCGATCAATGTCCTTACCAAGGGAGGACAATG
GATCTGCTCAGAGTACACAGACGAACACACATGGCTGATAAGCCATTCAAATGTGCACAC
TGCCCTAAATCTACGACCACGTCCAGTAACCTAATGAAGCACATACGACATGTTCACAGC
AAAACTAGGCCTTATAAGTGCACATATTGCGATAAAGCATTCTCTTACCAACATGATATG
AAGAGACACATAAAAGACATTCATCTAAGACAGGGTACCGTTGAATGCGATATATGTTTC
AAAAAATTTAATACAAAAAAAATATTACAAGGACATCGTTTTAAGATTCACAAAATAAAA
GGCGAAAGACACGGACGTTTGCCTTCTTATTTGCAATGTCAACAACCCAACGAAAATAAA
CAAAATGAATGCGAGTCTGTTGTCTATTAA
Protein sequence:
MTSLVLLKSILLASVLQKNKKKKKIKSKKLFSTNKIDLKICRICNEEKGEIPIFNDCIQP
NIPEEIKHFSGVSIFKTDNLPKQICQNCLDLLNGCIMFREMCQKTNQLMKRISSVPEIAP
CIRKEEDVKKDFTIDQNGSDESLNIPSPTCSEDNSEIWNCTSCKTEYYNLESYNKHLVEC
KTQINDLKPELDRKRTKETFLCDICGKVARSNANLLIHMAIHENIFPFKCDQCPYQGRTM
DLLRVHRRTHMADKPFKCAHCPKSTTTSSNLMKHIRHVHSKTRPYKCTYCDKAFSYQHDM
KRHIKDIHLRQGTVECDICFKKFNTKKILQGHRFKIHKIKGERHGRLPSYLQCQQPNENK
QNECESVVY