New model in OGS2.0 | DPOGS203245  |
---|---|
Genomic Position | scaffold142:+ 4181-5134 |
See gene structure | |
CDS Length | 867 |
Paired RNAseq reads   | 87 |
Single RNAseq reads   | 374 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013311 (7e-09) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | ND |
Best NR hit (blastx)   | unknown [Picea sitchensis] (9e-08) |
GeneOntology terms   | ND |
InterPro families   | IPR011042 Six-bladed beta-propeller, TolB-like |
Orthology group | ND |
Nucleotide sequence:
ATGAGAGTTCTTTTAATAGTTTTATACTTAAAAAGCTGTGTCACTTTCGATATACCTCAA
AATAATTGTAAAACAGATTTGTCTATAGACAATGATCATTACAATGTTACGGAGAGCTAC
GATCTAGGCAATTCCTTTCCTAGTGACGCTCACTATGATATAAACGGCAATCTATTCTTT
GTGGAGTCCGGTCGTAATTTGGAAGGATATTACTTTAATATAAAGACAATTAAAGCAAAT
ACGACATCAGCACAGGAAATATCAGGGCTTCCCCAGGGCGAGAGTTACTCTGTCGCTGTA
GACAAAAAGAATGAAAAAGTTTATTTTGGAACTAGCAGAGGCATCTTTCTTTATAAGCAT
ACTACAAATGAAGCTACTCTCGCCTCGGATCCAGATTTAAGATTAAACATGCTCTTCATA
GACAAAGATGGCAATAAATACATAACTGACAGCCCTGACGGCGTTGAAGAATTATATCTT
TTGGCAGAAAACAAAAAAATTCGTTTCAGTACCTTCGAAGATCTGAACGAAATGGCGGTA
GACGGTAGAAATAATTTTTATTTTATAAAAGAGGAAAAACTTTTTGTTCTAAAATCAAAT
TTGTCGAAACCATTATTCATAGGAGATGTTTCTTACGAAGGATACGCTCAGATATCATTT
TATAGGAACGTTGTATACATAGCCAGCGAAACTTTATCATACATACATGAGAACGACTCC
GGCCCACTTAAATTGGTGAAAAATATCCCAGGAAAAGTAACGGCAATTGCATTCGATAAA
ACCGGCAATTTCGTGCTCGGTACGAATGGGAAATTTTTGAAATACACCAAGATAGACAAT
AACGATTGCTATCACAGACGTAATTAA
Protein sequence:
MRVLLIVLYLKSCVTFDIPQNNCKTDLSIDNDHYNVTESYDLGNSFPSDAHYDINGNLFF
VESGRNLEGYYFNIKTIKANTTSAQEISGLPQGESYSVAVDKKNEKVYFGTSRGIFLYKH
TTNEATLASDPDLRLNMLFIDKDGNKYITDSPDGVEELYLLAENKKIRFSTFEDLNEMAV
DGRNNFYFIKEEKLFVLKSNLSKPLFIGDVSYEGYAQISFYRNVVYIASETLSYIHENDS
GPLKLVKNIPGKVTAIAFDKTGNFVLGTNGKFLKYTKIDNNDCYHRRN