New model in OGS2.0 | DPOGS206607  |
---|---|
Genomic Position | scaffold1413:- 15863-17068 |
See gene structure | |
CDS Length | 1206 |
Paired RNAseq reads   | 175 |
Single RNAseq reads   | 450 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008328 (3e-113) |
Best Drosophila hit   | Ank2, isoform F (3e-18) |
Best Human hit | ankyrin repeat and SOCS box protein 3 isoform a (1e-25) |
Best NR hit (blastp)   | PREDICTED: hypothetical protein [Monodelphis domestica] (6e-30) |
Best NR hit (blastx)   | PREDICTED: hypothetical protein [Monodelphis domestica] (6e-30) |
GeneOntology terms    | GO:0023034 intracellular signaling pathway GO:0008150 biological_process GO:0005575 cellular_component GO:0003674 molecular_function |
InterPro families    | IPR002110 Ankyrin repeat IPR020683 Ankyrin repeat-containing domain |
Orthology group | MCL40258 |
Nucleotide sequence:
ATGGATTTTAGCTCCCTCAACCCCTCAACATCTAATGCTTTGAATTTAGCAGCCAGGAAC
AATGATGTCAAGACTGTCAAGAGATTACTTAAGAAGATGAACCCAAATTGCTGTGATAAT
AGAGGTTGGACTTGCCTTCATGAAGCTGCTGCCAGTGATAGTTATGAAAGTCTAGATCTA
ATTCTGAATCATCAGAATCTTAATCCTCTAGTAGAAACTTATGATGGACATACAGCTCTG
TATCTTGCTTGCCAGTATATGAGTTCTACTAAGACCATAAAAAAGTTACTTAATGAAATA
CCTGATATAGCTAATTACGGCAGTACAGAACAGGTGACACCATTGCATGTTACATGTGGT
CAAGGAAGAACGGAAGTAATTCAGCTGTTATTAGATTATGGAGCCATGGTAGATGTTCAG
GACTTTGATGGAGACACTCCATTACATGATGCAGCCTTAGATAAACATGACAAGTCTGTG
TCCATTTTATTACATGCAGGAGCTAATCCTGAAATAAGAAATGAAGCCTCCCTTACTGCA
TTCCATCTAGCTTGTTACAAAGGCTGTTTTGAGGCAGTTGAAAACTTCCTACCGTTTATA
AATGATATAAATGAAATTGCACTAGATGGTGATACGCCACTGATTTTAGCTGCTCAAGGC
TCTAATCATGATGTCGTAAAATTGTTATTAATAAATAATGCAGATCCGAATTTAAAAAAT
AAAAGAGGTGATTTAGCCCTGACTAAAGCTTTAACTACGGGTAACAGTGAAATGTTTAAA
ACACTTCTCCAAGTGACAGACATAGCTGTGATTAGTCCAAATATAATATATTGGGCTTGT
AAGCCTCACATTTTCAACTTGGACATTCTTGAAAGCCTTCTCATATTTAATTTAGGTCCA
ACCTTTTTTGATTACTACGAACAATTCTACATAACTTTGGAGAAATTGGGTGGATACAGA
CCAAAATACTTAACTAATGCCCCCATCAACTCCCTACTAAGCATTAGTGAATACATATAC
ACACAGAGCCGTCAAAGATTTGAGGAATTTTTTTATTTATTCCTTATGGGCGGAGTTTTA
GTTAATGCTATGGATATAAATGAATGTCCTCCCCTTGTATACATACATTATTGTCTTCAT
TCCACCTGTTTTAAAGAGGTTACTTACATTCTAACTCATTTGAATTTAATTTTTATCTTT
GTATAA
Protein sequence:
MDFSSLNPSTSNALNLAARNNDVKTVKRLLKKMNPNCCDNRGWTCLHEAAASDSYESLDL
ILNHQNLNPLVETYDGHTALYLACQYMSSTKTIKKLLNEIPDIANYGSTEQVTPLHVTCG
QGRTEVIQLLLDYGAMVDVQDFDGDTPLHDAALDKHDKSVSILLHAGANPEIRNEASLTA
FHLACYKGCFEAVENFLPFINDINEIALDGDTPLILAAQGSNHDVVKLLLINNADPNLKN
KRGDLALTKALTTGNSEMFKTLLQVTDIAVISPNIIYWACKPHIFNLDILESLLIFNLGP
TFFDYYEQFYITLEKLGGYRPKYLTNAPINSLLSISEYIYTQSRQRFEEFFYLFLMGGVL
VNAMDINECPPLVYIHYCLHSTCFKEVTYILTHLNLIFIFV