| New model in OGS2.0 | DPOGS211936 |
|---|---|
| Genomic Position | scaffold1454:+ 5076-5631 |
| See gene structure | |
| CDS Length | 438 |
| Paired RNAseq reads | 14 |
| Single RNAseq reads | 81 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000883 (1e-24) |
| Best Drosophila hit | CG13510 (2e-19) |
| Best Human hit | lipopolysaccharide-induced tumor necrosis factor-alpha factor isoform 1 (6e-08) |
| Best NR hit (blastp) | GJ22026 [Drosophila virilis] (9e-21) |
| Best NR hit (blastx) | GI20298 [Drosophila mojavensis] (4e-24) |
| GeneOntology terms | GO:0004871 signal transducer activity GO:0005515 protein binding GO:0005576 extracellular region GO:0005765 lysosomal membrane GO:0005794 Golgi apparatus GO:0005813 centrosome GO:0006915 apoptosis GO:0016020 membrane GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB cascade GO:0043231 intracellular membrane-bounded organelle GO:0045449 regulation of transcription GO:0050699 WW domain binding |
| InterPro families | IPR006629 LPS-induced tumor necrosis factor alpha factor |
| Orthology group | MCL10536 |
Nucleotide sequence:
ATGGAATCGGATGTAGATCGACAGAACTATCCATCAACAGCTCCTCCGCCATATCCAGGA
CCACCAGAAAATCCCAACCAACCATATCCACCCCACTTTCCTGGAACAGGATACCCGACA
TACTCTACGTATCCTAATAATCCTTCCGTAACAGTAGTCCAAGGAGCAGCTGTACAAGTG
GTTCCAGGTGCACGGCATGTTGTGATTACAAACACCATGAGCCCGAAGCCTGCTACATAC
ACCTGTCCATCATGTCACCAGCAAATTATCACCAGGGTTGAATCTAATCCTACCATTAGG
ACTCATCTTCTTGCCGTCTTGCTATGTTTAATCGGTTGCTGGCCGTGTGTATGTGTCCCA
TACTGCACAGATTCTTGCAGTAACTCAGACCACTACTGCCCTAATTGTTCTGCGTACATC
GGTTCGTATGTAGGTTAA
Protein sequence:
MESDVDRQNYPSTAPPPYPGPPENPNQPYPPHFPGTGYPTYSTYPNNPSVTVVQGAAVQV
VPGARHVVITNTMSPKPATYTCPSCHQQIITRVESNPTIRTHLLAVLLCLIGCWPCVCVP
YCTDSCSNSDHYCPNCSAYIGSYVG