| New model in OGS2.0 | DPOGS209830 |
|---|---|
| Genomic Position | scaffold830:+ 83154-84595 |
| See gene structure | |
| CDS Length | 402 |
| Paired RNAseq reads | 18 |
| Single RNAseq reads | 294 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008053 (8e-39) |
| Best Drosophila hit | Sphingosine-1-phosphate lyase, isoform B (2e-19) |
| Best Human hit | sphingosine-1-phosphate lyase 1 (3e-13) |
| Best NR hit (blastp) | GL10551 [Drosophila persimilis] (1e-21) |
| Best NR hit (blastx) | GL10551 [Drosophila persimilis] (4e-21) |
| GeneOntology terms | GO:0008117 sphinganine-1-phosphate aldolase activity GO:0030176 integral to endoplasmic reticulum membrane GO:0030149 sphingolipid catabolic process GO:0019752 carboxylic acid metabolic process GO:0016831 carboxy-lyase activity GO:0030170 pyridoxal phosphate binding |
| InterPro families | IPR015424 Pyridoxal phosphate-dependent transferase, major domain IPR002129 Pyridoxal phosphate-dependent decarboxylase IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 |
| Orthology group | ND |
Nucleotide sequence:
ATGAGTGAGAGACCACAACCATTGAAAGCTATCAACCGTTTCTTTGAGGGCAAGGAACCA
TGGCAGATAGTTACCATGACTGCATCATCAGTACTTGCAATAGTGTGGGCCCATAGTCTA
TACAATGCTAAAGATCGATCTTACGACTGGAAGGGAGGTAACGTCTCCGGGGCTGTTTAT
CACTTGGATGAAGACATATCTAAAGTCGCCTGTGAAGCGTATTCGTCTACAGCCTACACA
AACCCCTTACACGCTGATGTGTTTCCCGGAATCAACAAAATGGAGGCCGAGATTGTTAGG
ATGACGGTCAATCTCTTCCACGGGGATGAGAACTGTTGTGGAACGATGTATTGTATTGGA
TTCTTGAATTTTGATTTATATGTGAATGTGAATGAGAATTGA
Protein sequence:
MSERPQPLKAINRFFEGKEPWQIVTMTASSVLAIVWAHSLYNAKDRSYDWKGGNVSGAVY
HLDEDISKVACEAYSSTAYTNPLHADVFPGINKMEAEIVRMTVNLFHGDENCCGTMYCIG
FLNFDLYVNVNEN