| New model in OGS2.0 | DPOGS209830 |
|---|---|
| Genomic Position | scaffold830:+ 86205-90525 |
| See gene structure | |
| CDS Length | 909 |
| Paired RNAseq reads | 955 |
| Single RNAseq reads | 2507 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008053 (2e-91) |
| Best Drosophila hit | Sphingosine-1-phosphate lyase, isoform B (4e-102) |
| Best Human hit | sphingosine-1-phosphate lyase 1 (3e-79) |
| Best NR hit (blastp) | PREDICTED: similar to sphingosine phosphate lyase isoform 1 [Tribolium castaneum] (5e-114) |
| Best NR hit (blastx) | PREDICTED: similar to sphingosine phosphate lyase isoform 1 [Tribolium castaneum] (3e-111) |
| GeneOntology terms | GO:0008117 sphinganine-1-phosphate aldolase activity GO:0030176 integral to endoplasmic reticulum membrane GO:0030149 sphingolipid catabolic process GO:0019752 carboxylic acid metabolic process GO:0016831 carboxy-lyase activity GO:0030170 pyridoxal phosphate binding |
| InterPro families | IPR002129 Pyridoxal phosphate-dependent decarboxylase IPR015424 Pyridoxal phosphate-dependent transferase, major domain IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 |
| Orthology group | MCL13719 |
Nucleotide sequence:
ATGCCGGTCTCGTCAGAAACTTATACCGTTGACATAGAGGCTGTCAAACGAGCTATAGGC
AGAAGGACATGTATGATAGTGGGTTCAGCTCCGAACTACCCGTACGGCACCATGGACGAT
ATAAAGTCGCTGTCAGACATAGCGCTGGAGTATGACGTGCCGTTACACGTAGACGCCTGT
CTCGGTGGGTTCATAGCGGCCTTCATGACGGAGGCTGGGTACAATGTACCCGTGTTCGAC
TTCAGACTGCCCGGTGTTGCCAGTATATCAGCTGACACCCATAAGTATGGATACGCGCCC
AAGGGTACGTCGGTGATAGTGTACCGTAAGGAAGAATACAGACATCACCAGTATACAGTG
AGCACCGAGTGGCCGGGAGGGGTGTACGGCTCGCCCACCGTTAATGGCAGTCGTGCGGGC
GGCCTGATAGCGGCGTGCTGGGCCACCATGATGTACGTCGGCCGCGAACAGTACGTGCGG
ATGGCGGGCGAGGTCGTCCACACGGCCAGGAGGATAGAGGACGAGATCCGTAAGATTAAT
GGATTGTTCATATTCGGCCAGCCCGCGACCACCGTGGTGGCGTTCGGGTCCAACAGCTTT
GACATCTTCAAACTAGCGGACCTCCTGCATCAGAAGGGTTGGAGCTTGAACGCCTTGCAA
TTTCCTTCCGGAATCCATATAGCGGTGACTCATGCCCACACTAGAGCTGGTGTCGCTGAC
AGGTTCTTGGCTGACCTGAAGGAAACTACAGCTGTTTGTATGAAGGAAGGAAGTGCTCCC
GTAGAGGGGAAGATGGCTATTTACGGTGTGGCACAGAGTATACCAGATAGAAGTCTAGTG
TCAGACATCACTAAATACTTCATCGATTCCATGTACTATTTACCCAAGCCCGGTGATGAT
GTGGAATGA
Protein sequence:
MPVSSETYTVDIEAVKRAIGRRTCMIVGSAPNYPYGTMDDIKSLSDIALEYDVPLHVDAC
LGGFIAAFMTEAGYNVPVFDFRLPGVASISADTHKYGYAPKGTSVIVYRKEEYRHHQYTV
STEWPGGVYGSPTVNGSRAGGLIAACWATMMYVGREQYVRMAGEVVHTARRIEDEIRKIN
GLFIFGQPATTVVAFGSNSFDIFKLADLLHQKGWSLNALQFPSGIHIAVTHAHTRAGVAD
RFLADLKETTAVCMKEGSAPVEGKMAIYGVAQSIPDRSLVSDITKYFIDSMYYLPKPGDD
VE