New model in OGS2.0 | DPOGS201554  |
---|---|
Genomic Position | scaffold1739:+ 290-2886 |
See gene structure | |
CDS Length | 984 |
Paired RNAseq reads   | 187 |
Single RNAseq reads   | 708 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006029 (4e-112) |
Best Drosophila hit   | heparan sulfate 2-O-sulfotransferase (2e-106) |
Best Human hit | heparan sulfate 2-O-sulfotransferase 1 isoform 1 (2e-101) |
Best NR hit (blastp)   | GJ17976 [Drosophila virilis] (1e-117) |
Best NR hit (blastx)   | GJ17976 [Drosophila virilis] (4e-117) |
GeneOntology terms    | GO:0004394 heparan sulfate 2-O-sulfotransferase activity GO:0007165 signal transduction GO:0016051 carbohydrate biosynthetic process GO:0016021 integral to membrane GO:0007424 open tracheal system development |
InterPro families    | IPR005331 Sulfotransferase IPR007734 Heparan sulphate 2-O-sulfotransferase |
Orthology group | MCL13671 |
Nucleotide sequence:
ATGTGTGTTGTTGTTGTTGTCATTCTATATTTCCAGTCGGAAATAACGCGACTGGAGGAC
GTGTATCGCAAACTGGAGTTCAGAGTGTTGCAGTCGCATTCCGAGGCTCGTCAATACACG
ACGAGAGACCCGCCGAGAGATGACGACAATCTAGTAGTTATTTATAATAGAGTTCCTAAG
ACTGGCTCCACGAGTTTCGTCGGCGTAGCTTATGATTTATGTAAGAAAAATCATTTCAAA
GTGCTACACATCAATATAACGGCCAACATGCACGTCATGTCGCTCAGTAATCAGTACAGA
TTTGCTCAGAATGTTACCAAGTGGCAGGAAGTGAAGCCGGCCCTCTACCATGGTCATATG
GCATTCCTTAACTTTGAAAGGTTGGGAACAAACGCGAGGCCTCTCTTCATCAATTTAATC
AGGAAGCCTCTAGACAGGCTCGTGTCTTATTATTATTTTCTACGACACGGTGATAACTTC
AGGCCTCATCTAGTGAGGAAGAAACATGGCGATAAAATGACATTTGACGAGTGCGTGGAG
AAGGGTCAGGCGGACTGTGACCCCAGCAACATGTGGCTCCAGGTGCCGTTCTTCTGTGGA
CATGCTGCCGAGTGCTGGCGTCCCGGTAGTCCGTGGGCGCTGCAGCAGGCGAAGCACAAC
CTGGTGCATCACTATCTAGTGGTGGGCGTGACGGAGGAGATGCTGGCCTTCATCAGCGTG
CTGGAGGCGACCCTGCCGCGCCTGTTCCGCGGCGCCACCGACCACTACCGCAGCAGCAAC
AGGTCGCACCTCCGGCAGACCAGCGCCAAGATAGAGCCCTCGCAGCGGACGGTCGACAGG
ATACAGCAGTCGGTCATATGGAAGATGGAGAACGAGCTGTACGAATTCGCGTCCGAACAC
TTCAAGTTCGTCAAGAAGAAAGTATTGAAGGAGGCCAACAGCGCGCCGCAGGTGTTCTTC
TACGAGAAGATACGACCGAAATGA
Protein sequence:
MCVVVVVILYFQSEITRLEDVYRKLEFRVLQSHSEARQYTTRDPPRDDDNLVVIYNRVPK
TGSTSFVGVAYDLCKKNHFKVLHINITANMHVMSLSNQYRFAQNVTKWQEVKPALYHGHM
AFLNFERLGTNARPLFINLIRKPLDRLVSYYYFLRHGDNFRPHLVRKKHGDKMTFDECVE
KGQADCDPSNMWLQVPFFCGHAAECWRPGSPWALQQAKHNLVHHYLVVGVTEEMLAFISV
LEATLPRLFRGATDHYRSSNRSHLRQTSAKIEPSQRTVDRIQQSVIWKMENELYEFASEH
FKFVKKKVLKEANSAPQVFFYEKIRPK