| New model in OGS2.0 | DPOGS206634 |
|---|---|
| Genomic Position | scaffold174:- 340213-360195 |
| See gene structure | |
| CDS Length | 798 |
| Paired RNAseq reads | 983 |
| Single RNAseq reads | 4157 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008337 (5e-86) |
| Best Drosophila hit | Tis11 homolog, isoform A (2e-36) |
| Best Human hit | zinc finger protein 36, C3H1 type-like 1 (2e-34) |
| Best NR hit (blastp) | AGAP010954-PA [Anopheles gambiae str. PEST] (1e-44) |
| Best NR hit (blastx) | butyrate response factor 1 (TIS11B protein) [Aedes aegypti] (3e-43) |
| GeneOntology terms | GO:0003677 DNA binding GO:0005634 nucleus GO:0008270 zinc ion binding GO:0003676 nucleic acid binding GO:0016246 RNA interference |
| InterPro families | IPR000571 Zinc finger, CCCH-type |
| Orthology group | MCL20232 |
Nucleotide sequence:
ATGCATCAGTCTGCGCTGTACGACTTTGGTGATCTGTTCTTGAAGGTGAGCTCCGAATAC
CTGACGGACGATGAAGTTGTTGCCACTAACCAATCTCGCCCAGTGCAGACGATGAATAGT
ACATTAAGCAGCGCACTCGGCCCAGTTGGCGGTACGAATGTTACTGCTAGTGTGGGCTGG
GATCAACACCCAGTTCTGGCCAGAGCTGCATCCGTGCCAGCACAGCGCGCACTTGCCGGC
CTTCTGAACAGCCTTGGCCATCGCCGCCTTGAACGTACCACCAGTGACCCCGCGCCCCCG
CCACCAGCCACCAGTCGATACAAGACCGAACTTTGCCGACCATTCGAAGAAGCCGGTGTT
TGCAAATACGGTGACAAGTGTCAATTCGCTCATGGAGTTCGAGAGCTCCGTAATCTACAG
CGCCATCCTAAGTATAAGACAGAGTTATGCCGCACCTTCCATTCTGTTGGTTTCTGCCCT
TACGGACCGAGGTGTCATTTCGTACACAACGCTGAAGAAGCGAGACGCCGTGAGCCACCG
TCACCAGGCGGTTCCTTGGCCTCATTATCGTCGGGCGGATCTCTAGCTTCCTACATGAGC
GATGGTTCCCGTTCACCGAGATCGCCTCATTCTCCATTGACTCCTCAGTCCCCTCTAGCG
CCGCACTCCCCGCCAGCCATGACGCCTCCAGACTACGCGTTCGCATTCCGCCGCCCTCAA
TCTCCGGAGCCGGAGGAAGATCGACTGCCCGTATTCAATCGCCTGTCGTCAGCGTTCGGC
GATCTCGTCATCGCCTAA
Protein sequence:
MHQSALYDFGDLFLKVSSEYLTDDEVVATNQSRPVQTMNSTLSSALGPVGGTNVTASVGW
DQHPVLARAASVPAQRALAGLLNSLGHRRLERTTSDPAPPPPATSRYKTELCRPFEEAGV
CKYGDKCQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEEARRREPP
SPGGSLASLSSGGSLASYMSDGSRSPRSPHSPLTPQSPLAPHSPPAMTPPDYAFAFRRPQ
SPEPEEDRLPVFNRLSSAFGDLVIA