| New model in OGS2.0 | DPOGS206642 |
|---|---|
| Genomic Position | scaffold174:- 149114-150692 |
| See gene structure | |
| CDS Length | 729 |
| Paired RNAseq reads | 167 |
| Single RNAseq reads | 591 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008497 (2e-77) |
| Best Drosophila hit | TBP-associated factor 8 (4e-66) |
| Best Human hit | transcription initiation factor TFIID subunit 8 (1e-43) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL006856 [Aedes aegypti] (5e-73) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL006856 [Aedes aegypti] (5e-74) |
| GeneOntology terms | GO:0006367 transcription initiation from RNA polymerase II promoter GO:0009987 cellular process GO:0005669 transcription factor TFIID complex GO:0005515 protein binding GO:0003702 RNA polymerase II transcription factor activity |
| InterPro families | IPR019473 Transcription factor TFIID, subunit 8, C-terminal IPR006565 Bromodomain transcription factor |
| Orthology group | MCL13347 |
Nucleotide sequence:
ATGGCTTTAGAAACTTTAACTGAAATCATTCAATGTTTTTTGGCAGAGGTTGGAAATTCA
GCAAAAGGATATTGCGAATTATCAGGACGTGTTGAACCTGTGCTGGGAGATGTTAAGATG
GCACTCGTAAATATGGGCATAAGTATTCAAGGTATAGAACAATATGCAGCTCGTCCAAAC
AGGCATGTAATTCAGGCACCACAACAGGCATTTGTTCCACGAACACCAGCTATGCTCTCG
GCTGGATCCAAAGCAAAACCCGCTCCACACATACCATTTCACTTGCCACCCTTACCAGAT
CCACATGCGTATATTAGAACACCTACTCACAAGCAACCAGTAACAGAATATGAGGCTATT
AGAGAAAAAGCTGCAAATCAGAAAAAAGATATTGAGAAAGCATTAACTAAATTCCTAGCG
AAAACAAGCGAAACACACAACCTCTTCAACACTGAAGATAATCAAGTTTTTCCATTGATA
GCATGCAAACCAACATTTCCTGCGTACTTGCCATGCCTTCTGCCGACTGACCAAGTGTTT
GATTTCGATGAACTAGAATATCACTTCCAGGTGGCGAATAGAACAGAAGATATGCCAGCG
GATAAGAAAGATCAATCAGACAATGAGGGTGAAAACGGCGGTGATAATGATAATGCAAAC
AACTCCCAATCAGAAAATCAAGATACTCCATCGGTATCGAGTCCAGAAAGAAATAAATCT
GGTGGATAA
Protein sequence:
MALETLTEIIQCFLAEVGNSAKGYCELSGRVEPVLGDVKMALVNMGISIQGIEQYAARPN
RHVIQAPQQAFVPRTPAMLSAGSKAKPAPHIPFHLPPLPDPHAYIRTPTHKQPVTEYEAI
REKAANQKKDIEKALTKFLAKTSETHNLFNTEDNQVFPLIACKPTFPAYLPCLLPTDQVF
DFDELEYHFQVANRTEDMPADKKDQSDNEGENGGDNDNANNSQSENQDTPSVSSPERNKS
GG