| New model in OGS2.0 | DPOGS206662 |
|---|---|
| Genomic Position | scaffold174:+ 74670-75147 |
| See gene structure | |
| CDS Length | 318 |
| Paired RNAseq reads | 77 |
| Single RNAseq reads | 360 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008493 (1e-42) |
| Best Drosophila hit | CG31950 (1e-19) |
| Best Human hit | LSM domain-containing protein 1 (3e-19) |
| Best NR hit (blastp) | PREDICTED: similar to small nuclear ribonucleoprotein, core, putative [Nasonia vitripennis] (4e-24) |
| Best NR hit (blastx) | PREDICTED: similar to small nuclear ribonucleoprotein, core, putative [Nasonia vitripennis] (1e-22) |
| GeneOntology terms | GO:0005634 nucleus GO:0005737 cytoplasm |
| InterPro families | IPR006649 Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type IPR001163 Like-Sm ribonucleoprotein (LSM) domain IPR010920 Like-Sm ribonucleoprotein (LSM)-related domain |
| Orthology group | MCL14794 |
Nucleotide sequence:
ATGTCTTCAACAACTTTAACACCAGTGGGGGACCCCAAGGTTATTGAGGAATTAGAAGGT
AAAGCGAAGTTGAGAAAATGGTTAAATATGAATTTTAGGATTGAAATGACTGATGGCAGA
GTATTAATAGGGGTGTTTCTTTGCACGGACAGGGATGCGAATGTAATATTAGGAGCCTGT
TCAGAATATTTAAAAAGCTCTGATGGTGAAACAGAGGAGCCTCGAGTACTTGGTCTAGTC
ATGGTGCCAGGACGTCACATTGTATCCATACAACTTGACAATACAAACCCACCACAAAAA
TATTTCTATGATGAATGA
Protein sequence:
MSSTTLTPVGDPKVIEELEGKAKLRKWLNMNFRIEMTDGRVLIGVFLCTDRDANVILGAC
SEYLKSSDGETEEPRVLGLVMVPGRHIVSIQLDNTNPPQKYFYDE