New model in OGS2.0 | DPOGS201025  |
---|---|
Genomic Position | scaffold497:+ 38771-39899 |
See gene structure | |
CDS Length | 933 |
Paired RNAseq reads   | 1179 |
Single RNAseq reads   | 2631 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009052 (4e-127) |
Best Drosophila hit   | CG1236 (2e-88) |
Best Human hit | glyoxylate reductase/hydroxypyruvate reductase (3e-73) |
Best NR hit (blastp)   | glyoxylate reductase/hydroxypyruvate reductase [Bombyx mori] (2e-137) |
Best NR hit (blastx)   | glyoxylate reductase/hydroxypyruvate reductase [Bombyx mori] (3e-128) |
GeneOntology terms    | GO:0004617 phosphoglycerate dehydrogenase activity GO:0008152 metabolic process GO:0051287 NAD or NADH binding |
InterPro families    | IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IPR016040 NAD(P)-binding domain |
Orthology group | MCL16249 |
Nucleotide sequence:
ATGCCAGATGTTGGTATTGAATTACTTAAGAAACAGTGTGAAATAAAGAAATGGGAAAAG
GCGAGTCCAATCCCAAGAGATGTTTTTCTGCAATCTGTATCTGGTGTGAATGGTATTTAC
TGTACACTGAACGACAAAATAGATAAGGAATTATTAGATGCTGCCGGATCAACTCTTAAG
GTTGTTGGGACTATATCTGTAGGCTATGACCATATTGACATAGCAGAGTGTAGGAAAAGA
GGTGTCCGAATAGGATACACACCAAATGTCTTGACTGATGCTACAGCTGAGCTTACCCTT
GCATTACTACTAACAACATCCAGACGTCTCTCGGAAGCTCAGTGTGAAGCTAAAACCGGT
GGTTGGGTGTCTTGGGCACCGACATGGATGACAGGCCCTGGTCTTGCTGGGTCTACCGTA
GGAATCGTAGGATTTGGTAGAATTGGTCAAGCTGTAGCCAGGAGAGTCAAAGCATTCAAC
ACAGCGAAGATTTTGTATTATAACCGTAGCGAAAAAGCCGAAGCCAAAGAGATTGGTGCT
ATCAAAGTCGGATTCGAAGAACTGCTGACACAGAGTGATTTTGTGATATGCTGTGCAGCT
TTAGTTCCAGAGACTAAAGAGATCTTCAACAAGAGCGCATTTGAAAAGATGAAACCAACA
GCTGTATTTGTGAATACCAGCCGTGGTGGAACGGTTGACCAGGGAGCCCTCATAGAAGCC
CTACAAAACAACACAATCAGAGCTGCCGGCTTGGACGTGACCACGCCCGAACCTCTACCA
CTCGATAATCCCTTGTTCAAGCTTAAAAACTGTGTCGTTCTACCACACATAGGTAGCGCT
ACGATCGAAGCGAGGAACGTTATGAGCGAGCTCACTGCCAAAAACATTATCTGCGCACTC
AATGAAAGTGAAATGCCGGCGGAACTTAAATAG
Protein sequence:
MPDVGIELLKKQCEIKKWEKASPIPRDVFLQSVSGVNGIYCTLNDKIDKELLDAAGSTLK
VVGTISVGYDHIDIAECRKRGVRIGYTPNVLTDATAELTLALLLTTSRRLSEAQCEAKTG
GWVSWAPTWMTGPGLAGSTVGIVGFGRIGQAVARRVKAFNTAKILYYNRSEKAEAKEIGA
IKVGFEELLTQSDFVICCAALVPETKEIFNKSAFEKMKPTAVFVNTSRGGTVDQGALIEA
LQNNTIRAAGLDVTTPEPLPLDNPLFKLKNCVVLPHIGSATIEARNVMSELTAKNIICAL
NESEMPAELK