| New model in OGS2.0 | DPOGS206427 |
|---|---|
| Genomic Position | scaffold1235:- 25628-28145 |
| See gene structure | |
| CDS Length | 588 |
| Paired RNAseq reads | 12414 |
| Single RNAseq reads | 39543 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013792 (9e-100) |
| Best Drosophila hit | ribosomal protein S11, isoform C (1e-52) |
| Best Human hit | 40S ribosomal protein S11 (3e-58) |
| Best NR hit (blastp) | 40S ribosomal protein S11 [Triatoma infestans] (3e-89) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC009438 [Tribolium castaneum] (2e-85) |
| GeneOntology terms | GO:0003735 structural constituent of ribosome GO:0005840 ribosome GO:0006412 translation GO:0005515 protein binding GO:0005622 intracellular GO:0022627 cytosolic small ribosomal subunit |
| InterPro families | IPR000266 Ribosomal protein S17 IPR019979 Ribosomal protein S17, conserved site IPR019978 Ribosomal protein S17, archaeal IPR016027 Nucleic acid-binding, OB-fold-like IPR012340 Nucleic acid-binding, OB-fold |
| Orthology group | MCL13825 |
Nucleotide sequence:
ATGGCGGATCAGACCGAACGTTCGTTTCAAAAGCAACCGACTGTCTTCTTGAACCGTAAG
AAAGGCATCGGTGTCAAACGAAGCAGGAAACCGCTAAGATATCATAAAGATGTCGGACTC
GGTTTCAAGACACCCAGAGAGACAGAGAAAGCGTTTCAGAAACAGGCTACGGTTTTCCTG
AACCGTAAAGGCGGTTTGAAGAGGAAGGATATGAGACACCACAAAAATGTCGGTTTAGGT
TTCAAGACGCCGCGTGAGGCAATTGAGGGCACATACATTGATAAGAAGTGTCCATTCACT
GGGAATGTTTCCATCCGAGGCAGAATCCTAACTGGTGTCGTACAGAAGATGAAAATGCAG
AGAACCATTGTCATCCGACGCGATTACCTACACTACCTGCCAAAATACAACCGTTTTGAG
AAACGACACAGGAATATGTCCGTTCATCTATCACCCTGTTTCAGGGATGTTGAACTCGGA
GACATCGTTACCATCGGCGAGTGCCGGCCGCTGTCCAAGACTGTGCGTTTCAACGTTCTC
AAGGTCTCCAAGGGAAAAGGCTCCAAAAAGTCTTTCAAAAAATTCTAA
Protein sequence:
MADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPRETEKAFQKQATVFL
NRKGGLKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ
RTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVELGDIVTIGECRPLSKTVRFNVL
KVSKGKGSKKSFKKF