| New model in OGS2.0 | DPOGS201421 |
|---|---|
| Genomic Position | scaffold931:+ 2452-10670 |
| See gene structure | |
| CDS Length | 1998 |
| Paired RNAseq reads | 216 |
| Single RNAseq reads | 543 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002574 (0.0) |
| Best Drosophila hit | CG5009 (8e-157) |
| Best Human hit | peroxisomal acyl-coenzyme A oxidase 1 isoform a (1e-138) |
| Best NR hit (blastp) | PREDICTED: similar to acyl-CoA oxidase [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to acyl-CoA oxidase [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0016401 palmitoyl-CoA oxidase activity GO:0055114 oxidation reduction GO:0003995 acyl-CoA dehydrogenase activity GO:0006635 fatty acid beta-oxidation GO:0050660 FAD binding GO:0005777 peroxisome |
| InterPro families | IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPR009100 Acyl-CoA dehydrogenase/oxidase IPR002655 Acyl-CoA oxidase, C-terminal IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPR023570 Acyl-CoA oxidase, peroxisomal IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IPR012258 Acyl-CoA oxidase |
| Orthology group | MCL10186 |
Nucleotide sequence:
ATGTCGGTCCAAATAAACGAGGATTTAGTCAAGGAAAGAAAAAAGTGTACATTCGATGTG
CAGGAACTAATACATTTTATAGACGGAGGGAAACAGAAAACCGAACTGAGGAAATATATC
GAAAACTTGGTGCTGAGCATTGACAATTTAAAAGATGATATACCAGAAGAATATCTCAGC
CATAAGGAATGCTATGAAAACGTTATTCGGAAGGGTTCCGTACTTTATGACATATTTTCG
GAACTTTCTAAAGATCGAAAGCATAAAGCTCATCAAGCTCCATCCAACGCTTATCGTATA
TCCGATGGGATTATGCAGAATGTGAACCCTTTTCTTCTGCACTTCGCTCTATTTGTACCG
GCCATCACCAACCAGGCCACTCCGGAACAGCAGGCGGAGTTTCTGAAACACGGGTTTGGC
ATCATTGGAACTTACGCTCAGACTGAACTCGGCCATGGCACGTTTTTAAGAGGGCTTGAG
ACGACAGCTACACTAGACTTGGAAACTGATGAGTTTGTATTGAATAGCCCGACTCTGACG
TCCTATAAATGGTGGCCCGGAGGATTGGGACATACCGCCAACCACTGTGTCGTGATGGCT
CAACTCTATGTCAAGGGAAAATGTCATGGACCACATTTATTCTTTGTACAAATTCGGGAT
ATTGAAACCCACGAGCCCCTACCAGGACTTAAATTGGGTGAGATTGGAGCCAAGATGGGT
TTCAACACAGCGGATAATGGTTTCCTTGGATTCCATAATTTTAGGATACCGAGAAATAAT
ATGCTAATGAAAAATTCTCAAGTTTTAAAAGATGGCACGTACGTGGAATCCAAAAACGAA
AAGTTAACTTACGGTTCTATGGTGTTTGTGAGGGTGTACCTTCTGTCCGACATGGCGTAT
ATGTTGGCGCGAGCTGCCACCATCAGCGTCAGATACTCCGCTGTGAGGCATCAATCGCAC
ATAAAACCTGATGAACCAGAAGTTCAAATATTAGATTTTGTGATCCAACAACATAAGCTG
TTTATATCAATAGCGACCAGTCATGCTTTCAAAATATGTGGCTTATGGTTGTGGCAAACC
TACTCGAAGGTCATGGAAGATATTGGCAAGGGGTCTATGGACCGTTTACCTGAATTGCAT
GCGCTCTCTTGCTGTCTTAAAACCACAAGTACTCGGGACGCAGGGTGGCTGATTGAGCAA
TGTCGGTTGGCTTGCGGCGGTCATGGCTACCTAATGTCCTCAAACCTGCCCTCGTTGTAC
ACGACAGCGACCGCTGCTATCACTTACGAGGGAGAGTCTACTGTGCTCCTGTTACAAACT
GCCAGATACTTGATAAAAAGCTGGAAACGCGCCATGGAAGGTGAATCTCTGCCAGCGACT
GTTAGCTTTCTGTCAGAGTACTTTAACAAGAGGTACAATAAATGGGAAAACACACCCAAA
GGAATCGTCGACGGACTTAAATTGGTAGTTGCTGGGGTAACTAAAATGTGCGCAGAGTCT
ATACAAAAGCATGTGTCAAGAGGGCAACAATATGAAGAAGCTTGGAATTCATCTTCTGTA
CAATTGATTAAAGCGAGTGAGGCATATTCCCGGGCTCTGCTTTGTGAAGTGTTTTGGTTC
GAAGTCGATAAAGTTTCTTCTACGTTATCCAACAATTTGGCCGTGGTGCTTAAACAACTG
GCGGAATTATACATTACTTATTGGGCTTTGGAGAAACGGGGTGATTTATTGGTATATACA
ACCATATCAAAAGATGATCTAGACAAACTTCAGGAGAGGTATGAGGAGTTGCTAGCCTTA
ATCAGACCCAACGCTGTAGGACTCGTTGATAGTTTTGACATCAGAGACGAGATTCTATGT
TCAACTCTTGGTGCTTACGACGGACGGGTTTACGAAAGGATGATGGAACACGCCCTAAAA
AGTCCCTTGAATGCTGAAACTGTCAATCAGAGTTTTCATAAATACATGAAACCAGTTATT
CTTAAACACAAAATTTAA
Protein sequence:
MSVQINEDLVKERKKCTFDVQELIHFIDGGKQKTELRKYIENLVLSIDNLKDDIPEEYLS
HKECYENVIRKGSVLYDIFSELSKDRKHKAHQAPSNAYRISDGIMQNVNPFLLHFALFVP
AITNQATPEQQAEFLKHGFGIIGTYAQTELGHGTFLRGLETTATLDLETDEFVLNSPTLT
SYKWWPGGLGHTANHCVVMAQLYVKGKCHGPHLFFVQIRDIETHEPLPGLKLGEIGAKMG
FNTADNGFLGFHNFRIPRNNMLMKNSQVLKDGTYVESKNEKLTYGSMVFVRVYLLSDMAY
MLARAATISVRYSAVRHQSHIKPDEPEVQILDFVIQQHKLFISIATSHAFKICGLWLWQT
YSKVMEDIGKGSMDRLPELHALSCCLKTTSTRDAGWLIEQCRLACGGHGYLMSSNLPSLY
TTATAAITYEGESTVLLLQTARYLIKSWKRAMEGESLPATVSFLSEYFNKRYNKWENTPK
GIVDGLKLVVAGVTKMCAESIQKHVSRGQQYEEAWNSSSVQLIKASEAYSRALLCEVFWF
EVDKVSSTLSNNLAVVLKQLAELYITYWALEKRGDLLVYTTISKDDLDKLQERYEELLAL
IRPNAVGLVDSFDIRDEILCSTLGAYDGRVYERMMEHALKSPLNAETVNQSFHKYMKPVI
LKHKI