| New model in OGS2.0 | DPOGS201423 |
|---|---|
| Genomic Position | scaffold931:+ 18826-25167 |
| See gene structure | |
| CDS Length | 2094 |
| Paired RNAseq reads | 705 |
| Single RNAseq reads | 1698 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002716 (0.0) |
| Best Drosophila hit | CG5009 (8e-165) |
| Best Human hit | peroxisomal acyl-coenzyme A oxidase 1 isoform a (2e-138) |
| Best NR hit (blastp) | PREDICTED: similar to acyl-CoA oxidase [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to acyl-CoA oxidase [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0016401 palmitoyl-CoA oxidase activity GO:0055114 oxidation reduction GO:0003995 acyl-CoA dehydrogenase activity GO:0006635 fatty acid beta-oxidation GO:0050660 FAD binding GO:0005777 peroxisome |
| InterPro families | IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPR009100 Acyl-CoA dehydrogenase/oxidase IPR002655 Acyl-CoA oxidase, C-terminal IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPR006090 Acyl-CoA oxidase/dehydrogenase, type 1 IPR023570 Acyl-CoA oxidase, peroxisomal IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IPR012258 Acyl-CoA oxidase |
| Orthology group | MCL10186 |
Nucleotide sequence:
ATGTCGACGATTACAGAGAACGAGGATTTAAGAAAAGAGAGAGCAAAATGCACGTTCAAT
ATAGAAGAACTGACTTATTTGTTAGACGACGGATACGAAAACACTAGACGAAGAAGGGAT
TTAGAAAATAAAGTTCTCAGTACGAAGGGTCTCTTGGATGAGATACCAGAAGAATATCTC
AGTCACAAGGAGAAATATGAAAACGTGATACGAAAATGTGTAAAATTGCATCGAGCCCTT
TTAGAGTATGATGATCTGAGAGACAAACCTATTGATGAAAAGATTAAAGCAATTCTTCGT
GACACGGTATCATTAGCTGTCACGAAAGACAACTCCCCGATGATGCTCCATTCGGGCATG
TTCTTGATGGCAATTGAAGGACAGGCAAATGAGAAACAACAGGAATATTGGCTTAAAAGG
GGAAGAAATATGGAAATTATAGGGACTTATGCTCAGACTGAATTGGGCCATGGGACCTTT
TTGAGAGGTTTAGAATTACGAGCAACTTATGATGAAAAAACTGAAGAATTTATTTTGCAC
AGTCCGACCTTAACTTCTTATAAGTGGTGGCCTGGAGGATTGGCTCACACAGCAAATTAC
GCTATTGTTATGGCACAACTTTATATAAAGGACAAGTGCTATGGCATGCAACCTTTTATG
GTACAGCTAAGGGATGAAGAAACACACATGCCTCTCCCGGGGATAAAGGTTGGGGAAATT
GGACCTAAACTGGGTTTTAACACAGTCAACAATGGATTCCTTGGTTTTGAAAATGTGAGA
ATACCAAGGGACAGAATGCTCATGAAAAATGCGCAAGTATTGAAGGATGGAACATTTATA
GCGTCCCCAAACAGCAAATTAACGTACAATACGATGGTGAATGTCCGTGTGCTGATCGTG
AATACAGTCGCCAAGTATTTGTCGTCAGCATCTACCATCGCCGTACGATATGCTGCTGTC
AGGAGACAATCACAAATGAAACCTGGTGAACCGGAACCCCAAATCTTGGACTACGTGACG
CAGCAACACAAGCTGATGATCGCTATCGCTACCAGCCACGCATATCATTTTACAGTTCGT
TGGCTCTACGACGTGTCTGACACTGTTAAAGAGAACATCACTAAGGGTCAACTGGATACA
TTGCCTGAGCTGCACGTGCTGGCCTGCGCTCTGAAAGTGTTGAGCTCGTCGGAGTGTACT
TCCCTGGTGGAAGTCTGTCGTCGGGCTTGCGGCGGTCACGGGTACATGCTGTCTTCCAAC
CTGCCGCAGCTGTATGGAGTATGCACTGCGACCATGACTTACGAGGGAGAGAATACAGTG
CTATTGTTACAAGTAGCCAGGTCTCTTGTGAAAGCTTGGGACCGAGCCGCTAGGGGTCAA
CCTTTGAGTCCATCAATGTCTTACATTGAAAACAAAACATTAGCAGCCAAATGGGACGCT
TCACTTGATGGAATAGTTAGAAATTTCCAGATTGTATCTAGAAGCAAACTGGCATCGAGC
GTGGCAAGTTTTCAACAGTACATGAAGTCTGGTTTATCTTACGAAGATGCCTGGAACAAA
GCTTCGGTACAACTGATCGCTGCGGCTGAGGCACATGGCAGGGCTATAGTTTTAGCGATA
TACAAACAACAAATCGAAAAGCAAGCGCGTAATGTGTCATTACCCCTGAGAGATGTTTTG
CATCAACTTCTAGAGTTGTATATGGTTTATTGGACACTGGAGAAAGTTGGCGACTTACTA
TTGTATACTCAAATATCGGAGAGAGATGTCAAAGCGTTGCAAAGGCGATATGAAGATCTA
TTGGAGATTTTGCGACCAAATGCTGTGGGATTGGTCGATGCTTTCGACATTAGAGATGAG
GTCCTCTGTTCAACGCTGGGTTCGTACGACGGTCGCGTGTACGAACGTCTGATGGAAGAA
GCAATGAAAAGTCCTCTCAACAAGGAGCCTGTCCTCTGTTCAACGCTGGGTTCGTACGAC
GGTCGCGTGTACGAACGTCTCATGGAAGAAGCAATGAAAAGTCCTCTCAACAAGGAGCCT
GTGAACGACACTTTCCACAAATATCTTAAGCCCTTTATGCGGGGCAAACTTTAA
Protein sequence:
MSTITENEDLRKERAKCTFNIEELTYLLDDGYENTRRRRDLENKVLSTKGLLDEIPEEYL
SHKEKYENVIRKCVKLHRALLEYDDLRDKPIDEKIKAILRDTVSLAVTKDNSPMMLHSGM
FLMAIEGQANEKQQEYWLKRGRNMEIIGTYAQTELGHGTFLRGLELRATYDEKTEEFILH
SPTLTSYKWWPGGLAHTANYAIVMAQLYIKDKCYGMQPFMVQLRDEETHMPLPGIKVGEI
GPKLGFNTVNNGFLGFENVRIPRDRMLMKNAQVLKDGTFIASPNSKLTYNTMVNVRVLIV
NTVAKYLSSASTIAVRYAAVRRQSQMKPGEPEPQILDYVTQQHKLMIAIATSHAYHFTVR
WLYDVSDTVKENITKGQLDTLPELHVLACALKVLSSSECTSLVEVCRRACGGHGYMLSSN
LPQLYGVCTATMTYEGENTVLLLQVARSLVKAWDRAARGQPLSPSMSYIENKTLAAKWDA
SLDGIVRNFQIVSRSKLASSVASFQQYMKSGLSYEDAWNKASVQLIAAAEAHGRAIVLAI
YKQQIEKQARNVSLPLRDVLHQLLELYMVYWTLEKVGDLLLYTQISERDVKALQRRYEDL
LEILRPNAVGLVDAFDIRDEVLCSTLGSYDGRVYERLMEEAMKSPLNKEPVLCSTLGSYD
GRVYERLMEEAMKSPLNKEPVNDTFHKYLKPFMRGKL