| New model in OGS2.0 | DPOGS211750 |
|---|---|
| Genomic Position | scaffold1277:+ 1287-23748 |
| See gene structure | |
| CDS Length | 1344 |
| Paired RNAseq reads | 1213 |
| Single RNAseq reads | 4790 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011558 (3e-83) |
| Best Drosophila hit | prominin, isoform C (6e-24) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to prominin [Nasonia vitripennis] (1e-28) |
| Best NR hit (blastx) | PREDICTED: similar to prominin [Nasonia vitripennis] (1e-28) |
| GeneOntology terms | GO:0042052 rhabdomere development GO:0003674 molecular_function GO:0016021 integral to membrane |
| InterPro families | IPR008795 Prominin |
| Orthology group | ND |
Nucleotide sequence:
ATGGGTATCTTTGATGCTTTGTTTCAAGATCTTGACAATGTTACTATAGAAGTGTCAGTC
AAAGACGTTCTGAGAGAATGTGAAAAGAATGAACCCGCCTACGTTGTGTTCCAGTTAGAA
AAAATACTAGACGTGAATAAGGAGACGTCTTACTTTGAGTGGGACGAACTACAAGATGAC
TTGAAAAGATTATCCGCTTCTATAGATGTTGGTTTCTTGAAGACGATATCAGATAACTTC
AATAAGTTACTCAATAGGATTCTCGTTATATCAGACGTCAATTTGACGAAATATAGAATG
GAATATAACGGACCCGTGGTAGGAAAGGATTTGCCTTCCTTTGTAGATCAACTGGAAAAC
GTTGCGATTCAAGTAACAGATTTAAATACAGCTGGAAGATTAGAGACTCTAGCGACGAGG
ACTCAAAGACTTCATTTATCGAACATAAAGCCACTAGAACATCTGCGAACAGAACTAGTG
TTCAAACTGACCGAACTTGAATTGCAAATGATGCCTTTTAGGCGGAAATTAAACATCTCA
TTAAGTCATATCCACACAGCGCAGTTTTATATTGATAATCAAGGAGACGTCATTGCTCAA
AAGATTCCCGTTATTTTAATTATGGCCTTTTTTAATATAACGGTCATCGCTCAACAACAG
TATCCACATTTGTTCACGGTGCAAACCAGAGAACCAGCTCCAATATACGAAGCCCAAAAT
GAAGGATTTCTAGGCCATCAATTCATCGTCTTCCTCTGCGCTATCGCCACCGCTCGTGCT
GGTGGGTTGTATGGAGCATCATATGGAGCGACATATGCTGCACCTGTAGCGTCATATGCA
GCAGCTCCTATCGCTACCTATGCTGCTGCCCCAGCTGTCTACAAGACCTATGCAGCCCCA
GCCATACAAGCATACTCTGCTCCAGCAGTATCTTACTCAGCACCATTAGTCAAAGCGGTC
GCTCCAGCTGTTTCGACTATCTCATCTTACTCAACTCACACGGCACATGGTACACCAGTG
GTAGCTAAAGCTATTGCTCCTGTAGCCATCCAGGCCGCACCCGCAGTATCTTATGCTGCT
GCTCCCGTTATTAAGAGTTACGCTGCACCAGCAATATCTTACGCAGCACCCGCTATTTCT
TCTTATGCCGCGTCTCCTGTGATTAAGAGTTACGCAGCCCCGGCCTACCAAGCATACTCT
GCTCCATCAGTATCATACGCTGCCCCCATTTCTTATGCATCCGCTCCTCTTATCAAATCT
GTAACATACTCTGCAGGTCCAGCGCTCTCATACGGAAGCCTCTCAGGACACTACGGTGGA
CTCTCCGGTCACTACGGTTGGTGA
Protein sequence:
MGIFDALFQDLDNVTIEVSVKDVLRECEKNEPAYVVFQLEKILDVNKETSYFEWDELQDD
LKRLSASIDVGFLKTISDNFNKLLNRILVISDVNLTKYRMEYNGPVVGKDLPSFVDQLEN
VAIQVTDLNTAGRLETLATRTQRLHLSNIKPLEHLRTELVFKLTELELQMMPFRRKLNIS
LSHIHTAQFYIDNQGDVIAQKIPVILIMAFFNITVIAQQQYPHLFTVQTREPAPIYEAQN
EGFLGHQFIVFLCAIATARAGGLYGASYGATYAAPVASYAAAPIATYAAAPAVYKTYAAP
AIQAYSAPAVSYSAPLVKAVAPAVSTISSYSTHTAHGTPVVAKAIAPVAIQAAPAVSYAA
APVIKSYAAPAISYAAPAISSYAASPVIKSYAAPAYQAYSAPSVSYAAPISYASAPLIKS
VTYSAGPALSYGSLSGHYGGLSGHYGW