New model in OGS2.0 | DPOGS212604  |
---|---|
Genomic Position | scaffold1505:- 24220-25325 |
See gene structure | |
CDS Length | 885 |
Paired RNAseq reads   | 96 |
Single RNAseq reads   | 478 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005222 (5e-107) |
Best Drosophila hit   | CG5792, isoform A (4e-36) |
Best Human hit | PIH1 domain-containing protein 1 (5e-26) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC012213 [Tribolium castaneum] (6e-55) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC012213 [Tribolium castaneum] (9e-56) |
GeneOntology terms    | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
InterPro families   | IPR012981 Nop17p |
Orthology group | MCL14518 |
Nucleotide sequence:
ATGAAAAATAAATCGATTTCCTTAGAAATTGATCCATCAATTATGGAGAAAAACATGAGA
ATAGTTAAGGACAATGCAGTCGAAGAAGAAATCAATAAACTTTTAGCGGAATCAGTACCG
TCTCAGACTGTCAAACCGAGACCTGGATTTTGTGTTAAAACATTTACTAAGCCTGACAAC
AAAAAGGTTTTTGTTAATATCTGCTTGACTGAGGCTATCCCTTGTCCTAGAAATATCAGT
AATGGAGAATTAATGCAAATACTGAACTCCGAGGATCCATCCAGCTATAGAGTGCCTATG
AGTATCGGTGAAGGAAGAACTGAACCAGACAAGTCAGGCATTCCAGCAACCGTCTATGAT
GTGGCTATAAATCCAGACTTTTTTTGTAAAATTGAAAAAGATGATCTATTCCAAACATTC
TTTCTCACTGTTGTGTTTGAGGGCTTACAAGATAAATATCAGTTTGAACTTGATATGCAA
AAATTTACAATCTTAAAGAATAGAAAGTCAATAGGGACCTTACAATCACATAGAATCCAA
GTAAGGGATGTGAAAAAATATGAAGACAAAACAAAACCATTGATCGAAGAGATTCCAAAG
CCGACACCTAAAGTAACTGAAGTTCCGGCTGTAAAGAAAAAGGAGTTAATATACAGATTG
AGAAGAGAGCCTCCGGTTGGAGAAATACAGTATTTGTTAGCTGAATTTATGATACCTTCG
ACAATAGAGCTAAAGGATTTAAATCTAGAAGTTGGTGAAGACAGACTTGTTCTGGACTCA
AAGGGATTGTTTCAAGTGGTTGATTTCTTCTTACCATGCAGCGTTGACCAGGATATTGTG
GACGCTCAATTGAATAGAAATAAAGATGTAAGTGTGGCTACATAA
Protein sequence:
MKNKSISLEIDPSIMEKNMRIVKDNAVEEEINKLLAESVPSQTVKPRPGFCVKTFTKPDN
KKVFVNICLTEAIPCPRNISNGELMQILNSEDPSSYRVPMSIGEGRTEPDKSGIPATVYD
VAINPDFFCKIEKDDLFQTFFLTVVFEGLQDKYQFELDMQKFTILKNRKSIGTLQSHRIQ
VRDVKKYEDKTKPLIEEIPKPTPKVTEVPAVKKKELIYRLRREPPVGEIQYLLAEFMIPS
TIELKDLNLEVGEDRLVLDSKGLFQVVDFFLPCSVDQDIVDAQLNRNKDVSVAT