| New model in OGS2.0 | DPOGS212613 |
|---|---|
| Genomic Position | scaffold1505:+ 59011-61997 |
| See gene structure | |
| CDS Length | 1503 |
| Paired RNAseq reads | 315 |
| Single RNAseq reads | 839 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005210 (3e-122) |
| Best Drosophila hit | CG42569 (7e-52) |
| Best Human hit | la-related protein 7 (3e-30) |
| Best NR hit (blastp) | PREDICTED: similar to multi-sex-combs [Tribolium castaneum] (2e-66) |
| Best NR hit (blastx) | PREDICTED: similar to ENSANGP00000006836 [Nasonia vitripennis] (6e-70) |
| GeneOntology terms | GO:0030529 ribonucleoprotein complex GO:0003723 RNA binding GO:0000166 nucleotide binding GO:0005634 nucleus GO:0003676 nucleic acid binding GO:0006396 RNA processing |
| InterPro families | IPR002344 Lupus La protein IPR006630 RNA-binding protein Lupus La IPR000504 RNA recognition motif domain IPR011991 Winged helix-turn-helix transcription repressor DNA-binding IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL12824 |
Nucleotide sequence:
ATGTCTGAATCCGAAAGTGCCGAAGTTATCGAAGAAACAAAACTTGATAACAGCCCCCGA
AAACGGGTTCGACATCGGAAAAAGCAGATATATGAGAATATTATGAAACAAATGGAATTC
TACTTTAGCGATGCTAATCTCAGTAAAGATAGATTTTTAGGGGATTTGGTTAAAAACGAT
CCCTATGTACCGATAACAGAATTTTTGAAATTTAATAAGATTCGATCTATGACTCAGGAT
GTTGGTGATATTGTTAAGGCCATGAAGCACTCAACTTTTTTGGAATTATCAGAAGACAAA
ACCAAAGTCGCTCGGAAAACTCCCATGCTTCCATATGATGCAGACCAGAGGACCATCTAT
GTTGAGTCAATACCAGTTACAGCAAGTCTTAATTGGCTGGATAGAGTCTTCTCTGACTAT
GGACAAGTTGCATATATATCACTGCCAAAGTTTAAGAACTCACAGAAAAACAAGGGTTTT
GCATTCATAGAATTTGCATCACCTCAAGACGCTCAAAACTGTATCAGTACATTTACCAAA
ATGGGATGTAAATTACCGTCATGTATGCCCCCGGAGGAATTATCTTCCATCAAAATGTTC
AGTGCGGAACCAGCGGAGTTATCAGAGAACAACTATGAGCCTCCTAAAAAGAAATCTAAA
AAGATTAAGGAGAAAAAACCGAAAGGCCTAGACCTAAAACAGGACGAGTCTGATAGTGAA
AAAAATTTGGATACACCAACGGAGGAGTCTAAGGAAAATATCTCTACAGCATGTGAGGAA
ACTAAAATAACAGATGCAGAATCCAAAGACGATATAACAAGTCATGATGAAATGACCGAT
GAAGTTCCAAGGAAGAAAAAAGTTAAAAAACGCTCTTCCAAAGAAAAGGGTAAATCGAAG
GCTCTCGCTAAAGGTGAAGTATCCAAGGGAGCTCTCTGGGGTCTGCAAGTGTTACCCAAA
TGTGAATGGAAAGCTCTTAGGAATAAATATCTCAATCTACAAAGGAAATACATGAAGGAA
ATTAAAAGCAATTGGCAGAATAGGAAGCACACCTACCCTGGAATACTCCCACCAGATCCA
GCTATTGAAGTACCAGTAAACACCACACCGGACATAGAAAGCGGCAAGAATTTAGAGCCG
TTACAAAAGATACCGGGAGTATTTGTTAAGGAGAATCTAAAGGAACCTTGTCTAGATGTG
AGGTTACTGAAAAGAACTATCAAAACTAACATTCATGTTCTACATGTCGAGGCGAAAGAG
GGACAGTCTGAAGTCATAATACGCTTTGATTCTTCCAAAGCGGCCGATGAGTATTGTACT
AGCAATACACACGCGTTAGTACTCCGCGGTTCCGACGAGCAAGAGCAATGGCGGCGCGCG
GAATCAGCACGCGCGTGTAAAAGGACACGAGGCCGCACACGCGTGCTGGCTCGCACCGCG
CCGCACACACTCGCACCCGCCTCGCCGCAACCCACACACACACATATTCGATTTGATGAA
TAA
Protein sequence:
MSESESAEVIEETKLDNSPRKRVRHRKKQIYENIMKQMEFYFSDANLSKDRFLGDLVKND
PYVPITEFLKFNKIRSMTQDVGDIVKAMKHSTFLELSEDKTKVARKTPMLPYDADQRTIY
VESIPVTASLNWLDRVFSDYGQVAYISLPKFKNSQKNKGFAFIEFASPQDAQNCISTFTK
MGCKLPSCMPPEELSSIKMFSAEPAELSENNYEPPKKKSKKIKEKKPKGLDLKQDESDSE
KNLDTPTEESKENISTACEETKITDAESKDDITSHDEMTDEVPRKKKVKKRSSKEKGKSK
ALAKGEVSKGALWGLQVLPKCEWKALRNKYLNLQRKYMKEIKSNWQNRKHTYPGILPPDP
AIEVPVNTTPDIESGKNLEPLQKIPGVFVKENLKEPCLDVRLLKRTIKTNIHVLHVEAKE
GQSEVIIRFDSSKAADEYCTSNTHALVLRGSDEQEQWRRAESARACKRTRGRTRVLARTA
PHTLAPASPQPTHTHIRFDE