| New model in OGS2.0 | DPOGS206218 |
|---|---|
| Genomic Position | scaffold3442:- 209-4021 |
| See gene structure | |
| CDS Length | 552 |
| Paired RNAseq reads | 482 |
| Single RNAseq reads | 1515 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009695 (6e-63) |
| Best Drosophila hit | chitinase 2 (1e-53) |
| Best Human hit | acidic mammalian chitinase isoform c (6e-29) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP005634-PA [Tribolium castaneum] (4e-61) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP005634-PA [Tribolium castaneum] (1e-60) |
| GeneOntology terms | GO:0004568 chitinase activity GO:0006036 cuticle chitin catabolic process GO:0005575 cellular_component GO:0043169 cation binding |
| InterPro families | IPR017853 Glycoside hydrolase, superfamily IPR001223 Glycoside hydrolase, family 18, catalytic domain IPR013781 Glycoside hydrolase, subgroup, catalytic core IPR001579 Glycoside hydrolase, chitinase active site IPR011583 Chitinase II |
| Orthology group | ND |
Nucleotide sequence:
ATGGTGGGTAGAAAGTGCTTATTGTTAACGATCTTCGCCGTCCTGGCGTCGGTTTTGGAC
GGACAGACCTTGGGAGGTCCTATGCATGGTAAGGTTGTGGTGTGCTACGTCGCGACCTGG
GCAGTGTACAGACCTGGTGCTGGAAAGTTTGATTTATCTGACATCGATCCAACTTTGTGC
ACCCACCTCATATACTCCTTCGCTGGCTTGGATCAGAGTACTGGCGGAATAAAGAGTCTC
GATCCCTGGCAAGATTTGGAAAAAGATTATGGTAAAGGTGGATACAAAAGGCTCGTGTCC
CTCAAAGCGAAATATCCTCACCTGAAGGTCACTGTGGCTATCGGTGGATGGAACGAAGGT
TCCAGCAAATACTCCGAGATGGCGTCCAAAAATGAAACTAGGGCGAAGTTTGTGCAAAGT
GTGGTTCAGTTTTTGGACACCTACAACTTTGACGGACTGGATTTGGACTGGGAGTATCCG
ACTAAGAGAGGAGGAGCTCCTGAAGACAAAGCAAATTATGTAGCCATGGTCAAGGTGAGC
GATGAGGGATGA
Protein sequence:
MVGRKCLLLTIFAVLASVLDGQTLGGPMHGKVVVCYVATWAVYRPGAGKFDLSDIDPTLC
THLIYSFAGLDQSTGGIKSLDPWQDLEKDYGKGGYKRLVSLKAKYPHLKVTVAIGGWNEG
SSKYSEMASKNETRAKFVQSVVQFLDTYNFDGLDLDWEYPTKRGGAPEDKANYVAMVKVS
DEG