| New model in OGS2.0 | DPOGS203099 |
|---|---|
| Genomic Position | scaffold2599:+ 14964-18496 |
| See gene structure | |
| CDS Length | 1467 |
| Paired RNAseq reads | 285 |
| Single RNAseq reads | 681 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011111 (1e-24) |
| Best Drosophila hit | crooked legs, isoform D (2e-57) |
| Best Human hit | zinc finger protein 471 (8e-74) |
| Best NR hit (blastp) | PREDICTED: similar to mCG7830 [Acyrthosiphon pisum] (3e-92) |
| Best NR hit (blastx) | PREDICTED: similar to mCG7830 [Acyrthosiphon pisum] (7e-101) |
| GeneOntology terms | GO:0003677 DNA binding GO:0046872 metal ion binding GO:0005634 nucleus GO:0005622 intracellular GO:0008270 zinc ion binding GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR012934 Zinc finger, AD-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like |
| Orthology group | MCL40603 |
Nucleotide sequence:
ATGATGGATACGTTCAGTGAAGGCGGTATTTGCCGCTGTTGTCATGCCCAAGGAACATTT
AAGAGTCTAAACGAAACGTATACAAGTGAAAACAGGCAAGATACTTACTACAACGCTCTG
CAAAAAACATTTAATATAGAAATAAAATATATATCAAGCATGGATGGTATGTCGATTTGT
AACGTTTGCATCGAGAAACTGCTAGATGGGGAATTATTTAAACAGCAGGTTGAGGCTTGC
GAGACAATCTTGAAACAGCACTACAGCAATAAAGATGATTTTAAGCAAGTAAAAGATGAA
CTCTATGACTTTCCCGACGTTGAAACAATAGTTAATGATGATTTAGATGATCAACCGCTG
TCGGCTTACAAGACTTTGGAAATTGATTGGAAAATCCAACGGAATGATAAATATGTAAAT
AAATCAGAAAATCCAAAAATAAAGAAGTACGGCTGCGATTTATGTGATAAAAGATTCTCA
TACAGCGGTTCCTTAGATGTACACATGCGAGGTCACAGCGGTGAAAAATCGTATATATGC
AGGCTATGTGACAGTAAATTTGCTTTGAACAAGGAATTAATACGACATATAAACTCTGAG
CACTCCCAAAATGGACTGTTCCCGTGTAATTTCTGCTCGAAGAAACTAGAAAATGCCAGA
TCTCTGAAAAATCATCTGACAATACATTTCGGAGAGAAGTTTAAATGTCCTCACTGTGAC
AAAGAGTTCCAAAGAAAGAAAGGCCTCAAGGAACACTTGAAGACGCACACGGGTGAAAGG
AATTTCAGTTGTACGCTGTGCGATAAATCCTTCTGCCACAACCAGACACTGAAATCACAT
ATGCTGACCCACACGGGCGAGAGGCCGTACGTGTGTTTTGTCTGCGGGAGAAGGTTTCCT
CAGCGAACACATCTGAAACGACACATCTTCTTAATACACACCGGCATAAAACCTCACACC
TGCAAAGTCTGCAATAAACAGTTCTCGAGCAAGAGCTATCTGTCGATACACCAACGGACG
CACACAGGAGAGAGACCCTATTCGTGTGATGTCTGCAAGAAAGACTTCACAGCATACACG
ACGTTAAAGGTCCATATGCGTGTGCATACTGGTCTAAAACCATATTTGTGTACATTCTGC
AATCGCCAATTCGCTCAGTTAGCGAGTTTTAAGCTCCACGAAAGGACACACACTGGAGAG
AGGCCGTACTCTTGTAAGGTTTGCAAGAAATCCTTCTCCGACAACGGCTACCTGAAGATC
CACATGCGTGTACACACGGGCGAGAAGCCGTTCAGCTGCGACATCTGCAAGCGTTCGTTC
AGAGAGACCGGACAACTGAAGCGCCACATGCGCGTGCACACGGGCGTGAAGCCCTACACG
TGCAAGGTGTGCAACAAACAAATCGGCAATCTGTCCAAACACATGCGTGTCCACACCGAC
GACAGGCCCTACAGCTGTAATGTGTGA
Protein sequence:
MMDTFSEGGICRCCHAQGTFKSLNETYTSENRQDTYYNALQKTFNIEIKYISSMDGMSIC
NVCIEKLLDGELFKQQVEACETILKQHYSNKDDFKQVKDELYDFPDVETIVNDDLDDQPL
SAYKTLEIDWKIQRNDKYVNKSENPKIKKYGCDLCDKRFSYSGSLDVHMRGHSGEKSYIC
RLCDSKFALNKELIRHINSEHSQNGLFPCNFCSKKLENARSLKNHLTIHFGEKFKCPHCD
KEFQRKKGLKEHLKTHTGERNFSCTLCDKSFCHNQTLKSHMLTHTGERPYVCFVCGRRFP
QRTHLKRHIFLIHTGIKPHTCKVCNKQFSSKSYLSIHQRTHTGERPYSCDVCKKDFTAYT
TLKVHMRVHTGLKPYLCTFCNRQFAQLASFKLHERTHTGERPYSCKVCKKSFSDNGYLKI
HMRVHTGEKPFSCDICKRSFRETGQLKRHMRVHTGVKPYTCKVCNKQIGNLSKHMRVHTD
DRPYSCNV