| New model in OGS2.0 | DPOGS208650 |
|---|---|
| Genomic Position | scaffold233:- 8382-13036 |
| See gene structure | |
| CDS Length | 1371 |
| Paired RNAseq reads | 8231 |
| Single RNAseq reads | 18429 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007783 (0.0) |
| Best Drosophila hit | skpA associated protein, isoform C (1e-157) |
| Best Human hit | succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial precursor (5e-134) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP004744-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP004744-PA [Tribolium castaneum] (5e-175) |
| GeneOntology terms | GO:0009361 succinate-CoA ligase complex (ADP-forming) GO:0004775 succinate-CoA ligase (ADP-forming) activity GO:0006099 tricarboxylic acid cycle GO:0005524 ATP binding GO:0010824 regulation of centrosome duplication GO:0007052 mitotic spindle organization GO:0005813 centrosome GO:0005875 microtubule associated complex |
| InterPro families | IPR016102 Succinyl-CoA synthetase-like IPR005809 Succinyl-CoA synthetase, beta subunit IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type IPR005811 ATP-citrate lyase/succinyl-CoA ligase IPR013815 ATP-grasp fold, subdomain 1 IPR013816 ATP-grasp fold, subdomain 2 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site IPR011761 ATP-grasp fold |
| Orthology group | MCL14243 |
Nucleotide sequence:
ATGGCGAATTTACTACCTCGTTCCTTTGGTCTTGCCGAAACAATTTTTGTTAAAAATGGG
ACGAAGTTGTTGGCAGCAACAACATCCCACAATCTACCAAATAATCAACAAGTTAGGCAT
TTGAATGTCCATGAATATGTGAGCTACACACTTCTTAGGGACAATGGCATTCCTGTGCCT
AAATTTAACATTGCCAAGACCCAGGAAGAGGCAGTCAAGTATGCACAAGAACTGAACACC
AAAGATATTGTACTAAAGGCTCAGGTTCTGGCTGGAGGTAGAGGAAAAGGTTCATTCAAA
AATGGGCTGAAAGGTGGTGTTAGAATGGTTGACAAACCTGAGGTGGCTGGAGATATTGTC
GGCAAGATGCTCAAGCAGTACTTGGTGACGAAGCAGACAGGTGCAGCAGGTCGTATTTGT
AACATGGTCATGGTTACCGAGAGGAAGTTCCCACGCAGAGAATTCTATGTAGCCATCATG
ATGGAAAGGAGTTTTAACGGTCCGGTAATCATTGCATCATCTCAAGGAGGTGTCAACATT
GAGGATGTGGCTGCCGAGAATCCCGATGCCATCACATATGAACCCATAGATATTGTCACC
GGCATCACTGATGAACAAATATCCCGTGTTATTAACAAGATAGGACTTCAAGAACATGCT
CCAGCGGCTAGTGATATGATGAAGAAAATGTATGACTTGTTCTGTAAGAAAGATGCTTTA
CTGATTGAAGTCAACCCTTATGCCGAGGACGCTCTAACAGGACAATTCTTCTGCCTGGAT
GCTAAGTTTAGATTTGACGACAACGCTCAGTTTAGACAGAAGGAACTCTTCAAGCTTAGA
GATATTTCCCAAGAAGACCCCAAAGAGATTGAGGCAGCCAAGTTTGACTTGAACTACATC
GCTCTTGACGGTAGTATCGGTTGTATGGTGAATGGAGCTGGTCTTGCTATGGCCACTATG
GATATCATCAAACTATACGGAGGGGACCCAGCCAACTTCCTCGACGTTGGAGGAGGCGCC
ACCGCTCAGGCCGTCTCGGAGGCATTCAAGATTATCTTATCAGACCCAAAGGTGTCTGCT
ATCTTAGTGAACATCTTCGGAGGAATTATGCGCTGTGACGTCATCGCCGAGGGTATCATC
AACGCTGCGAAGAACCTCAACATCCAAATACCAGTGATTGTACGACTTCAGGGTACCAAA
GTCAATGAGGCTCGCAAGTTGATCGCGGATTCGGGTCTGCGCATTGTACCCAGAGACGAC
CTGGACGAGGCGGCCCAGCTCGCCGTACAACTCTCCGAGATCGTGTCCCTCGCCAAGAAA
GCCGGAGTCGAGGTCAAATTCGATATCCCTAAATACATGTTAGAAAAGTAA
Protein sequence:
MANLLPRSFGLAETIFVKNGTKLLAATTSHNLPNNQQVRHLNVHEYVSYTLLRDNGIPVP
KFNIAKTQEEAVKYAQELNTKDIVLKAQVLAGGRGKGSFKNGLKGGVRMVDKPEVAGDIV
GKMLKQYLVTKQTGAAGRICNMVMVTERKFPRREFYVAIMMERSFNGPVIIASSQGGVNI
EDVAAENPDAITYEPIDIVTGITDEQISRVINKIGLQEHAPAASDMMKKMYDLFCKKDAL
LIEVNPYAEDALTGQFFCLDAKFRFDDNAQFRQKELFKLRDISQEDPKEIEAAKFDLNYI
ALDGSIGCMVNGAGLAMATMDIIKLYGGDPANFLDVGGGATAQAVSEAFKIILSDPKVSA
ILVNIFGGIMRCDVIAEGIINAAKNLNIQIPVIVRLQGTKVNEARKLIADSGLRIVPRDD
LDEAAQLAVQLSEIVSLAKKAGVEVKFDIPKYMLEK