| New model in OGS2.0 | DPOGS210928 DPOGS210927 |
|---|---|
| Genomic Position | scaffold4409:- 4128-4449 |
| See gene structure | |
| CDS Length | 219 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 8 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003079 (2e-24) |
| Best Drosophila hit | Sox21a (2e-26) |
| Best Human hit | transcription factor SOX-2 (2e-25) |
| Best NR hit (blastp) | PREDICTED: similar to SoxNeuro CG18024-PA isoform 1 [Apis mellifera] (2e-24) |
| Best NR hit (blastx) | predicted protein [Pediculus humanus corporis] (4e-23) |
| GeneOntology terms | GO:0045449 regulation of transcription GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0006911 phagocytosis, engulfment |
| InterPro families | IPR009071 High mobility group, superfamily IPR000910 High mobility group, HMG1/HMG2 |
| Orthology group | ND |
Nucleotide sequence:
ATGAACGCATTCATGGTGTGGTCCAGGGGTCAAAGGAGGAAGATGGCACAGGACAACCCG
AAGATGCACAACTCAGAGATATCCAAGAGACTTGGAGCCGAGTGGAAGTTGCTCACTGAG
ATGGAGAAGAGACCGTTCATCGATGAGGCGAAAAGACTCAGTATGGTTAAAAAAAAATAC
GTCAAAAGTCAAATTAAAGAAAAAGATGTTTGTCGATAA
Protein sequence:
MNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLSMVKKKY
VKSQIKEKDVCR