New model in OGS2.0 | DPOGS215883  |
---|---|
Genomic Position | scaffold1118:+ 36726-37708 |
See gene structure | |
CDS Length | 621 |
Paired RNAseq reads   | 54 |
Single RNAseq reads   | 562 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000277 (2e-34) |
Best Drosophila hit   | CG34461 (3e-19) |
Best Human hit | ND |
Best NR hit (blastp)   | cuticular protein RR-2 motif 87 [Bombyx mori] (5e-35) |
Best NR hit (blastx)   | cuticular protein CPR103 [Papilio xuthus] (5e-37) |
GeneOntology terms    | GO:0005575 cellular_component GO:0008150 biological_process GO:0005214 structural constituent of chitin-based cuticle |
InterPro families   | IPR000618 Insect cuticle protein |
Orthology group | MCL10880 |
Nucleotide sequence:
ATGCTGTCAAAGGTTCTTACGTTAGTAGCACTACTGGGTGCAGCAAGTGCTCAACATTAT
TCTCACGGACAAGCCACTTCATCCCAGTCCATCATTCGTCATGATAACCAACACGGATAC
AACCACGTTCAACCTATCGCCGTCCATTCAGCTCCTATCTCATACCATCAGCCTGCTATA
GCTGTTCACGCTGCCCCAGTCGCCAGTCACGTCAGTGTTCAACACGCTACTCCAGTCATT
CAACATGTTGCTCCAGTCATTCAACACGTGGCTCCCATAAGACACGTAGCTCCCATTGCT
CATGTAGCTCCCGTGGCTTACCATGCAGCACCAGCTTACGCTCAAGAACACCAAGAATAT
TATTCCCACCCCCAGTACGAGTTTGAGTACAGTGTAGCAGACACTCATACTGGTGACATC
AAATCGCAACACGAATCTCGCGACGGTGACCACGTGACCGGCTCCTACAGTCTTCACCAA
CCTGATGGTTCAGTACGTACCGTACACTACAGCGCGGATGCACACAGCGGATTCAACGCT
CAAGTAGAAAATTCTGCTCCTTCAACCCATGTCCAGCCTCAACCTCATTATGCTCCTGTT
CATGTTCTGTCCCACCACTAA
Protein sequence:
MLSKVLTLVALLGAASAQHYSHGQATSSQSIIRHDNQHGYNHVQPIAVHSAPISYHQPAI
AVHAAPVASHVSVQHATPVIQHVAPVIQHVAPIRHVAPIAHVAPVAYHAAPAYAQEHQEY
YSHPQYEFEYSVADTHTGDIKSQHESRDGDHVTGSYSLHQPDGSVRTVHYSADAHSGFNA
QVENSAPSTHVQPQPHYAPVHVLSHH