| New model in OGS2.0 | DPOGS211428 |
|---|---|
| Genomic Position | scaffold5910:- 21379-22596 |
| See gene structure | |
| CDS Length | 1218 |
| Paired RNAseq reads | 146 |
| Single RNAseq reads | 373 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004680 (2e-112) |
| Best Drosophila hit | target of poxn (2e-32) |
| Best Human hit | neurogenin-2 (1e-21) |
| Best NR hit (blastp) | GD14703 [Drosophila simulans] (2e-40) |
| Best NR hit (blastx) | target of poxn [Aedes aegypti] (6e-34) |
| GeneOntology terms | GO:0003704 specific RNA polymerase II transcription factor activity GO:0005634 nucleus GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0007423 sensory organ development GO:0030528 transcription regulator activity GO:0045449 regulation of transcription |
| InterPro families | IPR001092 Helix-loop-helix DNA-binding domain IPR011598 Helix-loop-helix DNA-binding |
| Orthology group | MCL18613 |
Nucleotide sequence:
ATGTACGCGACGGACTTCGACGATTACTGCGACTTCAACGACAGCGTCTGCAGCAATGAT
TCGGGCTTCGAGAGGTCTCATGCTGACTCCCACGCAACACCCTCATCTGTGAACACTACT
CTCAATTTTGATACATCAGACTTAGCTATATCTGTGATATCAAAAGATTCAACTGTCAGG
AGAAAACTCTTTCATGACGACTACACCTACATCTTCCCAGATCAGATAAAGGAGGTCACG
GAATTCGAAGATTTTAAGCCGATAGATAACACGTCGACACCGATAAAGAAAGAGAAAAAA
CCTAAAGATCCGAACAAACCCAAGAGGAAATACGCAAACGGAAAGAACAGAGTGACGAGA
TGTAAAAGTCCCACTCAGATATTGAGAATAAAGAGGAATAGAAGGATGAAGGCCAACGAC
AGGGAGAGAAACAGAATGCACATGTTGAACGAAGCCTTGGACAGGTTGAGATGTGTCTTA
CCAACGTTTCCAGAAGACACGAAGCTGACCAAAATAGAAACATTACGTTTTGCACACAAT
TATATATTTGCTTTAAGTCAGACGCTTGAATCTCTAGATAATATTAATTGTGGACAACCC
AGCGCCGAATATAATAATTACGACAAACTAACTTGCACTGCCGAGAAAGTTAACAAAGAC
GCCTTCAGGGAGATATTTCTTCCAAACAAGGACGAGTGCGGTGATGGATACAGGAGTTTC
CAAGGGTATAGTAAGCCGTTCCCTAACGGATCGAATTTCTTACAAACTTCCGAAGGAGTG
TTGATAAATGTTGGAAATGTAACGGTGTCTGTGAATAATAAAGGCGGTAACTGTATCACT
TCGACGACCGGGAGCGGCTTCTTCTCTCATCCCTCGAGTCTAGCGGACGACATACATCAA
GGTTACCCTCAAAGGCCTTACGATATCACCAGCTACACGGAAAGGTATGATCCCAGGATG
CAAAATGCATCGACGGAATACTTTAATCACAAAAATTATGAAATATTCAAAAACGCTTTT
GAAACAGCGAAAAATAGGAAGCAAGTCAGCGCCGTCCAGTACAATAATTACACGAATTTT
ACAAATTCCTATCACTGCAACGAGAAATATAGTTACACAGACGAGAGTTGTTATCCTCAA
AGTAACTATTATAATGATCAAAGATACGTAGGTAGAGATTTTTATAGAGGTCCTAGCATG
GTCAATGCACAAATTTAA
Protein sequence:
MYATDFDDYCDFNDSVCSNDSGFERSHADSHATPSSVNTTLNFDTSDLAISVISKDSTVR
RKLFHDDYTYIFPDQIKEVTEFEDFKPIDNTSTPIKKEKKPKDPNKPKRKYANGKNRVTR
CKSPTQILRIKRNRRMKANDRERNRMHMLNEALDRLRCVLPTFPEDTKLTKIETLRFAHN
YIFALSQTLESLDNINCGQPSAEYNNYDKLTCTAEKVNKDAFREIFLPNKDECGDGYRSF
QGYSKPFPNGSNFLQTSEGVLINVGNVTVSVNNKGGNCITSTTGSGFFSHPSSLADDIHQ
GYPQRPYDITSYTERYDPRMQNASTEYFNHKNYEIFKNAFETAKNRKQVSAVQYNNYTNF
TNSYHCNEKYSYTDESCYPQSNYYNDQRYVGRDFYRGPSMVNAQI