Genomic Position | scaffold3879:+ 6747-7718 |
---|---|
See gene structure | |
CDS Length | 912 |
Paired RNAseq reads   | 4 |
Single RNAseq reads   | 13 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA014330 (1e-29) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (7e-126) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (7e-123) |
GeneOntology terms    | GO:0005634 nucleus GO:0005737 cytoplasm |
InterPro families   | IPR005135 Endonuclease/exonuclease/phosphatase |
Orthology group | MCL10012 |
Nucleotide sequence:
ATGGCAGTTGCTCCATTAAAACCACTCCTCGCCACTCTTATGAATGACAATGACAAAAGA
CTGGGTACGGCTAGGGCGTCGCCGATAAACGATGCGCAGGCACATCGCTCTACACCTGCG
ATAAGTAGGCAAGGGCTACCGTGTCAAGTACGGGCACGGCTAAAGACGTCAGTACCCCAA
CGGAAACTCGGCTTGGCAACGTGGATTATTGGCTCTCTAACCGGACGATGCAGAAAACTC
GCAGATGTACTCATGAGACGTCGGGTCCAGTGTGCGTTCTTCCAAGAAACTCGATGGCAG
GGAAATAAGTCTCGGAACATCGGACAGGGTTACCGGCTGATATACACTGGGTCGCCTTCA
GACCATCGCTGCGACTGCCTGATGCGGGTGCGGGTACTGATCGAGGGAGTCATTACTAAC
TTGATCAGTGCTTATACTCTTCAGGCGGTATGTAGCGGGTCTGAAAAAGAGTCATTCTGG
GAGCAATTTGAAGAGGTTCTACGTGCTATTCCAGCTGCTGAAGTAATCATGGTTGGGGGG
GACATAAATGGCCACGTAGGTCGGCCTGCAAAAATGTTTGAACGTGTTCACGGTGGTTTT
GGTTATGGTCACCGCAATGCAGAGGGAGAAAATTTTCTCAGAACCTGTATTGGGTCTGAC
TTAGCCGTCGTGAACACGTTCTTCCAAAAGACTCCGCAGCACCCTATCACGTATAAGAGC
GGGTCCCACTCAAACCAAATAGATTATCTGCTGACTAGACGGTGCCATATCGGCAAGGTG
AGTAACCGTAAAGTCATTCTTGGTGAAAGCCTGACGACTCAACATCGCCTTCTTGTCATG
GACTATGTCGTTACGCCGAAAAAGAAAGTAGCCGAGAAACGTAAGCCTCGGATCAGTTCA
AGATTGTGGTAG
Protein sequence:
MAVAPLKPLLATLMNDNDKRLGTARASPINDAQAHRSTPAISRQGLPCQVRARLKTSVPQ
RKLGLATWIIGSLTGRCRKLADVLMRRRVQCAFFQETRWQGNKSRNIGQGYRLIYTGSPS
DHRCDCLMRVRVLIEGVITNLISAYTLQAVCSGSEKESFWEQFEEVLRAIPAAEVIMVGG
DINGHVGRPAKMFERVHGGFGYGHRNAEGENFLRTCIGSDLAVVNTFFQKTPQHPITYKS
GSHSNQIDYLLTRRCHIGKVSNRKVILGESLTTQHRLLVMDYVVTPKKKVAEKRKPRISS
RLW