| New model in OGS2.0 | DPOGS211014 |
|---|---|
| Genomic Position | scaffold180:- 49605-53219 |
| See gene structure | |
| CDS Length | 1866 |
| Paired RNAseq reads | 373 |
| Single RNAseq reads | 1109 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006496 (0.0) |
| Best Drosophila hit | will decrease acetylation (2e-47) |
| Best Human hit | TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform a (2e-70) |
| Best NR hit (blastp) | WD-repeat protein, putative [Pediculus humanus corporis] (8e-118) |
| Best NR hit (blastx) | WD-repeat protein, putative [Pediculus humanus corporis] (1e-107) |
| GeneOntology terms | GO:0005634 nucleus GO:0030528 transcription regulator activity GO:0045449 regulation of transcription |
| InterPro families | IPR001680 WD40 repeat IPR011046 WD40 repeat-like-containing domain IPR019775 WD40 repeat, conserved site IPR015943 WD40/YVTN repeat-like-containing domain IPR019781 WD40 repeat, subgroup IPR007582 TFIID subunit, WD40-associated region IPR020472 G-protein beta WD-40 repeat IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain |
| Orthology group | MCL14288 |
Nucleotide sequence:
ATGAAAAGGACTAGAAATGATGCAGTTAAAGCAGCCGTTACATCCTACTTAGAGCGAAGG
AATTATCCCGACATTGATTTCTTTAACCACAATAATTGTACTAGTCGCAGTGCTGAAGAA
ATGGCAGTGGCTACAATTGTACAATGTGAAGCTAGCCGTGCCAATTCGATTATGTTTTCT
CTTATTAATAATGACCCTGGAAATTATGACGCTCAGTACACAAAACTGGTTACTTTTATA
AAGGAAATAAATATTGAAAAGGTTAAAAATGAGTTACTTGGTTTACTTACACCATTGTTA
TGCCACTTATATTTGGAAATGCTGCGCGGTGGCCATGGTGGTGCAGCTCAAATGTTTCTA
AAGAGACACTCTGCTACATTACCACAAAAGGAGTTATCATACCACCAACCAATAGACGGC
AATCTTCCATCAGCACTCTACCGACCAAACAGCCTTGAGCAATTGTTCAATTCTCTACAA
AACGGTACTATAGATAATGAGACCCCAGAGAAAGACTATATGAATCAACTGTTAGATGAC
ATTGGAACTATATATACCTTGCAGGAAGTTGAATCTCGACCTTCCATAGCTGCTTTTCGG
TCCTGCAAATATGACATATATCTATCACAAGACTCTCTAAACCTTCTGAAGACTTTTCTG
GCTAGACATGGACATGTTTTAATCATACAAGTTCTACAAACATGGTTCCATATTGATATT
AATAATGACAATAAGAAAACTTCTGAAGACGATGACGAAGAACACAATGAAGATGAAAAT
CATATGAATGTTGCGAATTGTGATGAAAAACCAACTGATAAAAATGATGTGTTTTCCAAA
TGTAATGGTCACACAGAACATCAATCTGTAGACAAAGAATTGAGAGATCTGCAAGATGCT
ATTAAAGGTGTTAGAGAAACAATTGCACCACTCAAACTGTACAAAATTGCAACTCCTGAT
AGCCATCTGATATGCGGTAAAACAGACCAATACTGTAATGTGTTATGTGGAGGATTTGAA
AACTCAGAAATAAGACTTTGGGATCTTGGACAGAATAATGTTAAGAAAAAGATTAACAGA
AACATATCGGAAGTGGAAATTGCTTGTTGTATACCAGCCGAACCCGAAACTTCATTAGAC
AATACCTTTCAAATAGGAACAGGTTTACCACTTAGGGGTCATTCTGGTCCAATTCAAGCT
ATCAGTATTCTAGCTCAAGAGCAACTAGTGTTGTCCGCATCCCACGATAATACCATGAGG
GCATGGAAATTGTCAGATTATTCATGTGCTTCTATATACCGAGGTCACAATTATCCGATA
TGGTGCATGGACGTATCCAAAAATGGTTTATTTATTGTAACGGGATCTCATGATAGAACT
GCAAAACTATGGTCATTGGATCGCACATTTCCAGTTAGGATTTTTGTGGGACATTTATCT
GATGTTACCTGCGTAAAATTTCATCCCAACGAGGCGTACCTGGCGTCAGGAGGCGCGGAT
CGCACGGTTCGAATGTGGAGTGTATGTGACGCTAGACTTGTTCGTGTATTGTGTGGACAT
CGCGCTCCACCACGAGCACTGGCCTTCTCACCCTCAGGGAAACATTTGGCTAGTGCAGGT
GATGATAAAAAAATTAAAGTGTGGGATCTAGCCGCTTGCAACTGTATTCATGAATACAGA
GGACATCATAGTAAAGTGACGTCATTAGATTGGTCAGCGGTCGGAAAGGCTAGCTTAACT
AACAGAATATCGTCAGATCCTAATGACACAAATGCAGATAATTCAATATTATGCTCCGCT
GGTATGGATGGCATAGTAAAGGTTTTTTATGACACAATGAGTTTTTTGTTCACTCATGAT
TCATAG
Protein sequence:
MKRTRNDAVKAAVTSYLERRNYPDIDFFNHNNCTSRSAEEMAVATIVQCEASRANSIMFS
LINNDPGNYDAQYTKLVTFIKEINIEKVKNELLGLLTPLLCHLYLEMLRGGHGGAAQMFL
KRHSATLPQKELSYHQPIDGNLPSALYRPNSLEQLFNSLQNGTIDNETPEKDYMNQLLDD
IGTIYTLQEVESRPSIAAFRSCKYDIYLSQDSLNLLKTFLARHGHVLIIQVLQTWFHIDI
NNDNKKTSEDDDEEHNEDENHMNVANCDEKPTDKNDVFSKCNGHTEHQSVDKELRDLQDA
IKGVRETIAPLKLYKIATPDSHLICGKTDQYCNVLCGGFENSEIRLWDLGQNNVKKKINR
NISEVEIACCIPAEPETSLDNTFQIGTGLPLRGHSGPIQAISILAQEQLVLSASHDNTMR
AWKLSDYSCASIYRGHNYPIWCMDVSKNGLFIVTGSHDRTAKLWSLDRTFPVRIFVGHLS
DVTCVKFHPNEAYLASGGADRTVRMWSVCDARLVRVLCGHRAPPRALAFSPSGKHLASAG
DDKKIKVWDLAACNCIHEYRGHHSKVTSLDWSAVGKASLTNRISSDPNDTNADNSILCSA
GMDGIVKVFYDTMSFLFTHDS