| New model in OGS2.0 | DPOGS211015 |
|---|---|
| Genomic Position | scaffold180:- 44044-46657 |
| See gene structure | |
| CDS Length | 1002 |
| Paired RNAseq reads | 1573 |
| Single RNAseq reads | 3770 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006378 (1e-174) |
| Best Drosophila hit | steamer duck, isoform C (6e-147) |
| Best Human hit | LIM and senescent cell antigen-like-containing domain protein 2 isoform 2 (1e-114) |
| Best NR hit (blastp) | GA20717 [Drosophila pseudoobscura pseudoobscura] (3e-159) |
| Best NR hit (blastx) | focal adhesion protein PINCH-1 [Glossina morsitans morsitans] (1e-167) |
| GeneOntology terms | GO:0007475 apposition of dorsal and ventral imaginal disc-derived wing surfaces GO:0008270 zinc ion binding GO:0031252 cell leading edge GO:0046329 negative regulation of JNK cascade GO:0007391 dorsal closure GO:0008258 head involution GO:0009880 embryonic pattern specification |
| InterPro families | IPR001781 Zinc finger, LIM-type IPR017351 PINCH |
| Orthology group | MCL12030 |
Nucleotide sequence:
ATGTCTTTGGACAATATGTTCTGCACTCGGTGCGGAGACGGATTTGAGACCAATGAAAAG
ATAGTTAATTCTAATGGAGAGCTCTGGCATACAGGATGTTTTGTGTGTGCCCAATGCTTC
CGTGTATTTCCTGATGGCGTCTTCTTTGAATTTGAAGGTCGTAAATACTGCGAGCGTGAT
TTCCAAGTTTTATTTGCACCTTGCTGTGGCAAATGTCGGGAATTCATAATTGGTCGTGTG
ATAAAAGCAATGAATTCCAACTGGCATCCAGCTTGTTTCCGTTGTGAGGAATGTAACGCT
GAACTAGCTGATGCAGGGTTTATTAAACACGCCGGTCGTGCTTTGTGCCACGCTTGTAAC
GCAAGAATCAAGGCGGACGGACTTCAGAACTATATATGCCACAAATGCCATGGTGTGATC
GACGGGGAGCCGCTCCGTTACCGAGGTGAGGTATACCACGGTTATCATTTCACGTGTGCA
ACCTGCGGCCTAGAGTTGGACCACACCGCCCGCGAGGTGAAAAACCGGCCTGGATACGCT
GCCAATGACGTGAATAATCTATTCTGCCTCCGTTGTCATGATAAAATGGGTATACCCATT
TGTGGAGCTTGTCGCCGCCCTATCGAAGAAAGAATTGTTACTGCTTTGGGAAAACATTGG
CATGTTGAGCACTTCGTGTGTGCCAAATGTGAGAAACCGTTCCACGGTCATAGACACTAC
GAGAAGAAGGGACTTGCGTACTGCGAACAACACTATCACCAGCTGTTCGGCAACCTGTGC
TATGTTTGCAACCAAGTTATCGCAGGAGATGTTTTCACCGCATTGAACAAAGCATGGTGC
GTTCATCATTTCGCGTGCGCGGTCTGTGACACCGCGCTCAGCACTCGTAGTAAGTTCTAC
GAGTATGATGAGCGTCCAGCGTGTAGAAGGTGCTATGAGCGGCTACCATCAGAGCTACGG
CGTAGACTACGACGAGCTCACCATTATACTATGCGACGGTGA
Protein sequence:
MSLDNMFCTRCGDGFETNEKIVNSNGELWHTGCFVCAQCFRVFPDGVFFEFEGRKYCERD
FQVLFAPCCGKCREFIIGRVIKAMNSNWHPACFRCEECNAELADAGFIKHAGRALCHACN
ARIKADGLQNYICHKCHGVIDGEPLRYRGEVYHGYHFTCATCGLELDHTAREVKNRPGYA
ANDVNNLFCLRCHDKMGIPICGACRRPIEERIVTALGKHWHVEHFVCAKCEKPFHGHRHY
EKKGLAYCEQHYHQLFGNLCYVCNQVIAGDVFTALNKAWCVHHFACAVCDTALSTRSKFY
EYDERPACRRCYERLPSELRRRLRRAHHYTMRR