| New model in OGS2.0 | DPOGS205847 |
|---|---|
| Genomic Position | scaffold318:+ 83725-86441 |
| See gene structure | |
| CDS Length | 996 |
| Paired RNAseq reads | 353 |
| Single RNAseq reads | 1047 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010904 (1e-80) |
| Best Drosophila hit | CG10263, isoform D (6e-60) |
| Best Human hit | E3 ubiquitin-protein ligase Hakai (3e-23) |
| Best NR hit (blastp) | similar to CG10263-PA [Papilio xuthus] (2e-89) |
| Best NR hit (blastx) | similar to CG10263-PA [Papilio xuthus] (1e-76) |
| GeneOntology terms | GO:0005515 protein binding GO:0008270 zinc ion binding |
| InterPro families | IPR001841 Zinc finger, RING-type IPR017907 Zinc finger, RING-type, conserved site |
| Orthology group | MCL16026 |
Nucleotide sequence:
ATGTCGTCAGATGAAGAAGAATGTTCCGTAGAAGAAACCAGTCAAGAACAAGATGAACCT
CCGCCGGAAGAAACTAAAGAAGAACCAGAACAACCAGCAGAACCTGTTAAATTGGAGGTA
CCTTCTGATATATCTCAATTAGAAGCTCCAGTATTCACAACACTTCAGAGAGGTCCCCCA
GAACCGATGCTGCGGTTGGATTGGAGCCACCGAGCCACACTTATAGGGGAAAAAGTTCTT
AATCCCATGATATATTGCTGTGATACTTGCTCAAAACCTATACTAATCTATGGAAGAATG
ATACCTTGTAAACATGTGTTCTGCCTGACCTGTGCAAGAGCTGATAACACACATTGTCCC
AGATGCCGAGAGAAGGTGTTAAGAGTGGAACAGACCGGACTGGGTACAGTATTCATGTGC
ACACATTCAGGAACAAGATATGGTAACACAGGCTGCAGAAGAACTTATCTGTCTCAGCGT
GATCTCCAAGCACACATCAATCACCGTCATGTCGGTGACAAGAACGACCCGGAACCTTCA
CCGCATCCTGCGCTTGCTGTGGTTAAGCCGCTTCCGGCGGTGGTGGGGGGCGGGAGCAGC
GCTGACCCTCGCCACCCTCAACACGCTCATGAACGGCGACCACGCACCAACCTCATCACT
GTACCGATACACGAGGACTCCCACTCATACTACAATTACTACCAGTCACAGCCGGTTCCT
CCGCCCGCTATGCCCACGGTGGGCAGTGTGGGAAACGTCGGTCCTCCCGTGAGCAACGTA
GGTGTCGGTCTGGGCGGCGTCATGTCCGTACCGCCGCCCTACTACGCCGCGCCCTACGCA
CCACAAACTGCGCCGCCGGCTACATACGTTGGAGGAGCGCCGATGACAACCAACGTGGCG
GGCGTGTCGCCAATGCCGGCGATGTCCACGGACAATCGCTGGCCGGAAGGATATCCGCCA
GTGCAGTGGCCCAACACCCACCATTATTACAGGTAG
Protein sequence:
MSSDEEECSVEETSQEQDEPPPEETKEEPEQPAEPVKLEVPSDISQLEAPVFTTLQRGPP
EPMLRLDWSHRATLIGEKVLNPMIYCCDTCSKPILIYGRMIPCKHVFCLTCARADNTHCP
RCREKVLRVEQTGLGTVFMCTHSGTRYGNTGCRRTYLSQRDLQAHINHRHVGDKNDPEPS
PHPALAVVKPLPAVVGGGSSADPRHPQHAHERRPRTNLITVPIHEDSHSYYNYYQSQPVP
PPAMPTVGSVGNVGPPVSNVGVGLGGVMSVPPPYYAAPYAPQTAPPATYVGGAPMTTNVA
GVSPMPAMSTDNRWPEGYPPVQWPNTHHYYR