| New model in OGS2.0 | DPOGS206230 |
|---|---|
| Genomic Position | scaffold2241:+ 1419-10822 |
| See gene structure | |
| CDS Length | 2658 |
| Paired RNAseq reads | 400 |
| Single RNAseq reads | 1711 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003214 (3e-20) |
| Best Drosophila hit | mediator complex subunit 16 (1e-16) |
| Best Human hit | mediator of RNA polymerase II transcription subunit 16 (1e-11) |
| Best NR hit (blastp) | PREDICTED: similar to mediator complex, 95kD-subunit, putative [Nasonia vitripennis] (5e-81) |
| Best NR hit (blastx) | PREDICTED: similar to mediator complex, 95kD-subunit, putative [Nasonia vitripennis] (5e-55) |
| GeneOntology terms | GO:0016592 mediator complex GO:0005634 nucleus GO:0006366 transcription from RNA polymerase II promoter GO:0016455 RNA polymerase II transcription mediator activity GO:0003712 transcription cofactor activity GO:0006367 transcription initiation from RNA polymerase II promoter |
| InterPro families | IPR015943 WD40/YVTN repeat-like-containing domain IPR021665 Mediator complex subunit Med16 |
| Orthology group | MCL14852 |
Nucleotide sequence:
ATGGAGCTCATTTATTCTATGAGACGTAAGCCCCTTAAATGTGAGCCCCCACATTTTAAT
AGCACAGACCCAGAAGTAGTGCGGCCAATATGCACCATATCAATACGCAACATCATAGCG
TTCTCATCACTTACGGAACTGTCCGACACTGATGGTGACACCTGGGGTGGTCATGTGTAT
GTTTGTGATATTGACACACCCTGGGACGCACACAAAGTCACCAGCACCGTACATCCTGTT
TCAGCTCTAGAATGGGACGGTGAAGGCAAGCAGCTCCTGGTCGCGACTACCGTCGGTGAC
GTGTCTGTGTTTGGACAGAAAGACTACCTCCTTAATGAGTGGACTTGTTTATATACAGCT
AATTTTCCAGGAGAGCACATCATCCAAGCCACATTCTTCCACAATGGCCGCAGAGTGGTC
ACTGTGGATAAGAAACCAGATGTCCCTATATATGAACGAATGCAGTTGTTGAGGTCTACA
CCTACTTTGAAAGGAAGTTCCTCTCCCTACAACGATAGACCCGGCACACGCACGGTGAAT
CCATGGAATGATGAGAGGGGCGTGTGGTGCGCGGGCGCGTGCGTGGTGTCTGGTTCAGGG
CTGGTGGGGGCGCTGACGGCGGGGGAGGGAGGCCGGGCTCTCGTCGCCACGGACTGTATG
AGGCCCGCCCGGGACCACCTCTCATCGGCGTCCATCACACACAAGACCGGCAGTATGTTG
ATCGCTGCATGTTTCCGTCGTGGCTGTAAGCGCGCAGTCCGCGTCGCCCGCTGTACGGTG
TCCAGGCCGAGCTCGTCCAAATGCGCTCCTGTGTGTATCCAGCTGCAGCCGCTGCCGACG
GTATACTTGGAGGATGACGTCACTTCCGTCTGTGTCAACCACCCTCCAGTGTCCATATCG
TGGTGGCTGAGGGACGACACCGACGCCCTGCTGATCGCCTCACACAACCTGACCCTGTGG
AAGATGGTGGAGAGGTCACACCCGCTACACAAACTCTTAGCTAAAGGTCCGGTGCAAGGT
AGTACGACCCCGGGAGGGGGACCCAAGACAGGGGACTGTTTTAATACTATCGTGTGGCAG
CAGGCGGCGTCCTGGCAGCTGGAAGGTTCCTCCCCCGCCACCGCCGTGAGCGCCGCCCGC
CACGCCGCGCCCGCGCTCGCCGTGCTGGTGACCTCGCGGGCGATGCACTTGCTCACACGA
GACTCGCACCACTATCTCGTCTCCCGTCCTATTATAACGGGCGGCTCTTCTGAGGTCAGC
TCGGAGGCTACTCCTCCCAAGAAAGCCAACTATGGAGGAACAGTTCCCAGCGGCGCCCCC
TGCGCGACCGTGCACAGCGTGGCCATGTCGTGGCTGGGGGCGGTGTGTGTGGCGCTGGAC
ACGCACTCGCAGATACACGTGTATAGACTACAACCGCAAGCAGACATGTCGTCGTCTCAG
TTCGTCTCTCAGGCGGTGAGTCAGCTGGAGTACGGGCTGGTGGCCGGAGTGGACACCAGG
GACGTGCTGCTCACTGTGGGCGGAGTCAGCGAGGGCGTGTACGAGAGACTAACAGAAAAT
TTCCAAAGACAGCCGGCCTCCTTCCAGCAGTACTTCTATCACACCTGGCTCCGGCTGAGG
ATAGCTCTGTGCTGGTTATCTCCGTCGTCGTCGTGCAGCGCGGCGTCCCTCCAGTCCCTC
CAGAGCGCCCTGAGCGTGTGGGCCGCGTGTGTCGCGGGGCTCCGGGACGACCGCGGGGAC
TCCGCCCTGCTCGCCGCGCTCGCCAACGACGACCTCATCGCCGACGATAAGAATCTCCTC
GCACTGGAGGCGAAAGCGGATCTATCGAGTGAGGCGACCAGTCAAGCGCTGCAGCCGCTC
CAAGCGCTGAGGCGACTGTTGCAGCGAGCGCTGAACATAGCGCTCACTATGCTGGCGTCG
CTTCAGCCCTCTAACTTACATCAGCTGCACACACACAACGTGTACGAGCTGTACTCGGAC
CCGGTAGCGGTGTCAGTGCTGCGGCGGCTGGTGTGCGTGAGTCGCGCCTGCGGCCGCGGC
GGGGACCCCCTCAGCCGCCCGCTCGCCAGGCTCGCCTCCGCTCACAAGCCGGACCTGATA
GAAGAGTGTATGTCCGTCTGTTTGTCGTGGACGGCCCGCGAATGGGAGGGACCCCCACGC
TGCTGTGTGTCCGCCCCCCACCCGCGACAGCTACCCCTATATCTGGAGTACGGTGTAGAG
CCGGACATGTTGCGTTACGTCCCCGAGCCGCCTCCGCACGCTCAGTCTGATACCTCGGCG
TCACAAGACATGGACTCCATCAGGTACATGTACCTGGGCGGGCGCGGTCGCGCCGCTCGC
TGGCGGCAGTGCGGTCGCTGCGGGGCGCGCGCCCTTCCGGAGCCCCGTGCCGCGCCTCAC
GCCCTGCAGAGGGCTTATGATGGAAGATATCTAGCACACTGCAGATGTGGAGGGAACTGG
ACGCTCGTGTCTAACCGTTTGGTCCGTGACTACGTTCTTGTAATTAATCGCGATTTCCTC
AAATATTATTGCAACGCACCTGTTGTTCTTAAAATTTCAATAGTTAATTCGTGTAATTAT
ATTATGGCAGACAAAAAAGCCACCACAGGAGTGCTAGCGGCGAGGTGCAGCGCGGCCGGA
CATCTTGTTATCATGTAA
Protein sequence:
MELIYSMRRKPLKCEPPHFNSTDPEVVRPICTISIRNIIAFSSLTELSDTDGDTWGGHVY
VCDIDTPWDAHKVTSTVHPVSALEWDGEGKQLLVATTVGDVSVFGQKDYLLNEWTCLYTA
NFPGEHIIQATFFHNGRRVVTVDKKPDVPIYERMQLLRSTPTLKGSSSPYNDRPGTRTVN
PWNDERGVWCAGACVVSGSGLVGALTAGEGGRALVATDCMRPARDHLSSASITHKTGSML
IAACFRRGCKRAVRVARCTVSRPSSSKCAPVCIQLQPLPTVYLEDDVTSVCVNHPPVSIS
WWLRDDTDALLIASHNLTLWKMVERSHPLHKLLAKGPVQGSTTPGGGPKTGDCFNTIVWQ
QAASWQLEGSSPATAVSAARHAAPALAVLVTSRAMHLLTRDSHHYLVSRPIITGGSSEVS
SEATPPKKANYGGTVPSGAPCATVHSVAMSWLGAVCVALDTHSQIHVYRLQPQADMSSSQ
FVSQAVSQLEYGLVAGVDTRDVLLTVGGVSEGVYERLTENFQRQPASFQQYFYHTWLRLR
IALCWLSPSSSCSAASLQSLQSALSVWAACVAGLRDDRGDSALLAALANDDLIADDKNLL
ALEAKADLSSEATSQALQPLQALRRLLQRALNIALTMLASLQPSNLHQLHTHNVYELYSD
PVAVSVLRRLVCVSRACGRGGDPLSRPLARLASAHKPDLIEECMSVCLSWTAREWEGPPR
CCVSAPHPRQLPLYLEYGVEPDMLRYVPEPPPHAQSDTSASQDMDSIRYMYLGGRGRAAR
WRQCGRCGARALPEPRAAPHALQRAYDGRYLAHCRCGGNWTLVSNRLVRDYVLVINRDFL
KYYCNAPVVLKISIVNSCNYIMADKKATTGVLAARCSAAGHLVIM