| New model in OGS2.0 | DPOGS212017 |
|---|---|
| Genomic Position | scaffold6820:- 169-4848 |
| See gene structure | |
| CDS Length | 1437 |
| Paired RNAseq reads | 376 |
| Single RNAseq reads | 908 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010171 (3e-28) |
| Best Drosophila hit | CG5205 (2e-153) |
| Best Human hit | activating signal cointegrator 1 complex subunit 3 isoform a (2e-150) |
| Best NR hit (blastp) | PREDICTED: similar to ENSANGP00000013875 [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | activating signal cointegrator 1 complex subunit 3 [Culex quinquefasciatus] (3e-177) |
| GeneOntology terms | GO:0003724 RNA helicase activity GO:0004386 helicase activity GO:0005682 U5 snRNP GO:0000398 nuclear mRNA splicing, via spliceosome GO:0030532 small nuclear ribonucleoprotein complex GO:0003676 nucleic acid binding GO:0005524 ATP binding GO:0008026 ATP-dependent helicase activity |
| InterPro families | IPR014001 DEAD-like helicase IPR004179 Sec63 domain IPR023290 Sec63-domain IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal |
| Orthology group | MCL10194 |
Nucleotide sequence:
ATGGAGGTGTTCAACACCATGGTACGAAAATCTATGACTCAGGGTTATGTGCTGGAGATG
CTGACCAGGTGTTCGGATTTCCAGCAGTTGAAAGTCAGAAAAGAAGAATTGACAGAACTG
TGGAATCTGAAAGACATGTATTGTGAGTTACGAATCGAAGACGCTCCAGAGGACATACAC
TGGAAGATCAACATCTTATTACAGACATATCTGTCACGCGGTCGGGTCAGCGGGTCCTCG
CTGCAATCAGACTTGAATTACATCAGCCAGAACGCGGTTCGTATAGTTCGCGCGCTTTTT
GAAATAACGTTAAGGAAAAATAACGCATACATGGCGGGATTGTATCTCAAGATGGCGAAA
ATGATGGAACTTCAGCTATGGGATTTCTATAGTGATATGAGACAGTTCAACTGCTTCCCC
AACGAGATATTGAAGCATATAGAGTACCCGTTACTGAAACCGGATCAACTGAGAGATATG
GATTGGAAGGAAATAGGCGACCTAATACGTAACCCTAAGACAGCTCGCCATTTGAAGAAA
TGCGCCGAGGAATTCCCATTGCTGGACATGGAGGCTAGCTTACATCCTATAACGAGGACT
GTATTGAGAATAAGACTCACCATCACACCCAACTTTAAGTGGAATGACAAGTACCACGGT
AAGGCACCAGAGGCCTTTTGGATCTGGGTCGAAGATCCCGACACTGATATAATGTACTAC
CATGAATATTTCCTCATTACCAAAAAACAAGTCATAACAAACGAGCCTCAAGAATTAGTT
ATAACGATTCCTATATCTGAGCCTTTGCCTCCTCAGTACTATATCAGAGCTACTTCAGAA
AGATGGCTAGGCTCAGAGAGTGTACTGCCTTTGACATTCCAACATCTAATTCTACCAGAA
ACTCATCCACCTCATACAGATCTGCTAGAGTTACAACCTCTGCCAGTGACAGCCCTGAAC
AATCCCTCCTACGAAATGCTATACAACTTCAGTCACTTCAATCCGATACAGACACAAATA
TTCCATGCGCTGTATCACACCGACCATAACATACTACTCGGAGCGCCGACCGGCTCGGGG
AAGACGATAGTCGCTGAAGTGGCCATGTTCAGGGTCTTCAACCAATATCCGGGTTGTAAG
GTCGTCTACATCGCGCCACTTAAAGCTCTTGTCAAAGAAAGAATAAAGGATTGGAAAGTG
AGGCTGGAAGAGAAACTTGGAAAAAACGTCGTGGAATTAACGGGTGACGTTTCACCGGAT
ATCCGGGCCATAAGACAGTCGCAAGTCATAGTGACGACTCCTGAGAAGTGGGACGGCATC
AGCAGGTCCTGGCAGACGAGGAATTACGTGAGGGACGTGGCTCTCATAGTCATAGATGAG
ATACACCTGTTGGGAGAAGATAGGGGACCGGTTTTAGAAGTCATTGTGTCCAGGTGA
Protein sequence:
MEVFNTMVRKSMTQGYVLEMLTRCSDFQQLKVRKEELTELWNLKDMYCELRIEDAPEDIH
WKINILLQTYLSRGRVSGSSLQSDLNYISQNAVRIVRALFEITLRKNNAYMAGLYLKMAK
MMELQLWDFYSDMRQFNCFPNEILKHIEYPLLKPDQLRDMDWKEIGDLIRNPKTARHLKK
CAEEFPLLDMEASLHPITRTVLRIRLTITPNFKWNDKYHGKAPEAFWIWVEDPDTDIMYY
HEYFLITKKQVITNEPQELVITIPISEPLPPQYYIRATSERWLGSESVLPLTFQHLILPE
THPPHTDLLELQPLPVTALNNPSYEMLYNFSHFNPIQTQIFHALYHTDHNILLGAPTGSG
KTIVAEVAMFRVFNQYPGCKVVYIAPLKALVKERIKDWKVRLEEKLGKNVVELTGDVSPD
IRAIRQSQVIVTTPEKWDGISRSWQTRNYVRDVALIVIDEIHLLGEDRGPVLEVIVSR